Tin_g20246


Description : not classified & original description: none


Gene families : OG0000061 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000061_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g20246
Cluster HCCA: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
Aop_g22119 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g25446 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g25785 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g51514 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g05180 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g06279 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g22582 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g29789 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g46365 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g15596 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16447 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g16492 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g16500 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28645 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g56802 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g19215 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g32115 AtCESA1, RSW1, CESA1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05962 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g35439 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g41747 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g00144 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05520 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29932 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g18118 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g34553 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g34974 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g41738 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004014 adenosylmethionine decarboxylase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006595 polyamine metabolic process IEP HCCA
BP GO:0006596 polyamine biosynthetic process IEP HCCA
BP GO:0006597 spermine biosynthetic process IEP HCCA
BP GO:0008215 spermine metabolic process IEP HCCA
BP GO:0008216 spermidine metabolic process IEP HCCA
BP GO:0008295 spermidine biosynthetic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009309 amine biosynthetic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0042401 biogenic amine biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!