Tin_g20099 (GATA15)

Aliases : GATA15

Description : transcription factor *(A/B-GATA) & original description: none

Gene families : OG0000100 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000100_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Tin_g20099

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00064p00107710	GATA22, CGA1,...	RNA biosynthesis.transcriptional activation.C2C2...	0.04	OrthoFinder output from all 47 species
AT5G56860	GNC, GATA21	GATA type zinc finger transcription factor family protein	0.03	OrthoFinder output from all 47 species
Aob_g02176	GNC, GATA21	transcription factor *(A/B-GATA) & original description: none	0.04	OrthoFinder output from all 47 species
Ceric.02G072900.1	GATA17, Ceric.02G072900	transcription factor *(A/B-GATA) & original description:...	0.02	OrthoFinder output from all 47 species
Dde_g21831	GNC, GATA21	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g05496	GATA22, CGA1, GNL	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
LOC_Os06g37450.1	GATA22, CGA1,...	transcription factor (GATA)	0.02	OrthoFinder output from all 47 species
LOC_Os12g42970.1	GATA4, LOC_Os12g42970	transcription factor (GATA)	0.02	OrthoFinder output from all 47 species
MA_82238g0030	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Msp_g05287	GATA22, CGA1, GNL	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g44006	GNC, GATA21	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0128.g021913	GATA15	transcription factor *(A/B-GATA) & original description:...	0.04	OrthoFinder output from all 47 species
Tin_g20932	GATA4	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e032219_P001	GATA12, Zm00001e032219	transcription factor (GATA)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0005984	disaccharide metabolic process	IEP	HCCA
BP	GO:0005991	trehalose metabolic process	IEP	HCCA
BP	GO:0005992	trehalose biosynthetic process	IEP	HCCA
BP	GO:0009311	oligosaccharide metabolic process	IEP	HCCA
BP	GO:0009312	oligosaccharide biosynthetic process	IEP	HCCA
BP	GO:0016051	carbohydrate biosynthetic process	IEP	HCCA
MF	GO:0016791	phosphatase activity	IEP	HCCA
BP	GO:0034637	cellular carbohydrate biosynthetic process	IEP	HCCA
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	HCCA
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	HCCA
BP	GO:0046351	disaccharide biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000679	Znf_GATA	281	315

External Links

No external refs found!

Tin_g20099 (GATA15)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation