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  5. Tin_g18046

Tin_g18046 (ATZIP4, ZIP4)


Aliases : ATZIP4, ZIP4

Description : metal cation transporter *(ZIP) & original description: none


Gene families : OG0000472 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000472_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g18046
Cluster HCCA: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00062p00183880 ZIP5,... Solute transport.carrier-mediated transport.ZIP... 0.03 OrthoFinder output from all 47 species
AT2G32270 ZIP3 zinc transporter 3 precursor 0.04 OrthoFinder output from all 47 species
Aop_g06465 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0014.g013568 ZIP1 metal cation transporter *(ZIP) & original description: CDS=1-972 0.03 OrthoFinder output from all 47 species
Ceric.14G032100.1 ATZIP4, ZIP4,... metal cation transporter *(ZIP) & original description:... 0.05 OrthoFinder output from all 47 species
Dac_g45131 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g31389 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description: none 0.05 OrthoFinder output from all 47 species
MA_140715g0010 ATZIP4, ZIP4 metal cation transporter (ZIP) 0.02 OrthoFinder output from all 47 species
Solyc02g069190.4.1 ZIP10, Solyc02g069190 metal cation transporter (ZIP) 0.04 OrthoFinder output from all 47 species
Solyc02g069200.3.1 ATIRT1, IRT1,... metal cation transporter (ZIP) 0.04 OrthoFinder output from all 47 species
Solyc07g043200.2.1 ZIP3, Solyc07g043200 metal cation transporter (ZIP) 0.04 OrthoFinder output from all 47 species
Solyc07g043230.3.1 ZIP3, Solyc07g043230 metal cation transporter (ZIP) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0030001 metal ion transport IEA Interproscan
MF GO:0046873 metal ion transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR003689 ZIP 19 383
No external refs found!