Tin_g17254


Description : not classified & original description: none


Gene families : OG0000815 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000815_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g17254

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00026p00165550 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00069p00143740 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT5G62865 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.07 OrthoFinder output from all 47 species
Aev_g30384 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g31538 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g09190 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g35972 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g01953 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Cba_g08683 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g19602 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g20118 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g30447 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ehy_g29049 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01007791001 No alias No description available 0.03 OrthoFinder output from all 47 species
Len_g31552 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g36795 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g28544 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_7806654g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_9917267g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp3g01130.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g07673 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g38281 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g31036 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g20125 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0070.g016721 No alias not classified & original description: CDS=1-624 0.03 OrthoFinder output from all 47 species
Solyc07g007130.1.1 Solyc07g007130 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g07513 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e015798_P001 Zm00001e015798 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004014 adenosylmethionine decarboxylase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006595 polyamine metabolic process IEP HCCA
BP GO:0006596 polyamine biosynthetic process IEP HCCA
BP GO:0006597 spermine biosynthetic process IEP HCCA
BP GO:0008215 spermine metabolic process IEP HCCA
BP GO:0008216 spermidine metabolic process IEP HCCA
BP GO:0008295 spermidine biosynthetic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009309 amine biosynthetic process IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0042401 biogenic amine biosynthetic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!