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Description : component *(Snu13) of snoRNP rRNA methylation complex & original description: none
Gene families : OG0002183 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002183_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Tin_g17080 | |
| Cluster | HCCA: Cluster_175 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00043p00189790 | evm_27.TU.AmTr_v1... | RNA processing.RNA modification.rRNA/tRNA... | 0.06 | OrthoFinder output from all 47 species | |
| AT4G12600 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.04 | OrthoFinder output from all 47 species | |
| AT5G20160 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.04 | OrthoFinder output from all 47 species | |
| Als_g09839 | No alias | component *(Snu13) of snoRNP rRNA methylation complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g25287 | No alias | component *(Snu13) of snoRNP rRNA methylation complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g45351 | No alias | component *(Snu13) of snoRNP rRNA methylation complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0280.g062289 | No alias | component *(Snu13) of snoRNP rRNA methylation complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Cre06.g249250 | No alias | RNA processing.RNA modification.rRNA/tRNA... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g15283 | No alias | component *(Snu13) of snoRNP rRNA methylation complex &... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_01849 | No alias | protein factor NHP2L1/SNU13 of U4/U6 small nuclear... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g13800.1 | LOC_Os03g13800 | protein factor NHP2L1/SNU13 of U4/U6 small nuclear... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g06572 | No alias | component *(Snu13) of snoRNP rRNA methylation complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g08742 | No alias | component *(Snu13) of snoRNP rRNA methylation complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e038611_P002 | Zm00001e038611 | protein factor NHP2L1/SNU13 of U4/U6 small nuclear... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
| CC | GO:0005789 | endoplasmic reticulum membrane | IEP | HCCA |
| BP | GO:0006413 | translational initiation | IEP | HCCA |
| BP | GO:0006497 | protein lipidation | IEP | HCCA |
| BP | GO:0006505 | GPI anchor metabolic process | IEP | HCCA |
| BP | GO:0006506 | GPI anchor biosynthetic process | IEP | HCCA |
| BP | GO:0006643 | membrane lipid metabolic process | IEP | HCCA |
| BP | GO:0006644 | phospholipid metabolic process | IEP | HCCA |
| BP | GO:0006650 | glycerophospholipid metabolic process | IEP | HCCA |
| BP | GO:0006661 | phosphatidylinositol biosynthetic process | IEP | HCCA |
| BP | GO:0006664 | glycolipid metabolic process | IEP | HCCA |
| BP | GO:0006996 | organelle organization | IEP | HCCA |
| BP | GO:0007029 | endoplasmic reticulum organization | IEP | HCCA |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008654 | phospholipid biosynthetic process | IEP | HCCA |
| BP | GO:0009247 | glycolipid biosynthetic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0010035 | response to inorganic substance | IEP | HCCA |
| BP | GO:0010038 | response to metal ion | IEP | HCCA |
| CC | GO:0016020 | membrane | IEP | HCCA |
| CC | GO:0031090 | organelle membrane | IEP | HCCA |
| BP | GO:0042221 | response to chemical | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0045017 | glycerolipid biosynthetic process | IEP | HCCA |
| MF | GO:0045182 | translation regulator activity | IEP | HCCA |
| BP | GO:0046467 | membrane lipid biosynthetic process | IEP | HCCA |
| BP | GO:0046474 | glycerophospholipid biosynthetic process | IEP | HCCA |
| BP | GO:0046486 | glycerolipid metabolic process | IEP | HCCA |
| BP | GO:0046488 | phosphatidylinositol metabolic process | IEP | HCCA |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
| BP | GO:0090407 | organophosphate biosynthetic process | IEP | HCCA |
| BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | HCCA |
| BP | GO:1903509 | liposaccharide metabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004038 | Ribosomal_L7Ae/L30e/S12e/Gad45 | 35 | 123 |
| No external refs found! |