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  5. Tin_g16528

Tin_g16528 (ZFN1)


Aliases : ZFN1

Description : regulatory protein of RNA homeostasis & original description: none


Gene families : OG0000297 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000297_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g16528
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
Gb_37448 No alias C3H zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Ore_g07740 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Pnu_g12395 ZFN3 regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 186 211
IPR000571 Znf_CCCH 95 120
IPR000571 Znf_CCCH 141 165
IPR000571 Znf_CCCH 353 378
IPR000571 Znf_CCCH 399 424
No external refs found!