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  5. Tin_g16510

Tin_g16510


Description : not classified & original description: none


Gene families : OG0000218 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000218_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g16510
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00076p00180150 ATRD22, RD22,... BURP domain-containing protein 17 OS=Oryza sativa subsp. japonica 0.03 OrthoFinder output from all 47 species
AT1G70370 PG2 polygalacturonase 2 0.02 OrthoFinder output from all 47 species
Adi_g046811 PG1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g075863 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g075864 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g078180 PG1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g12888 PG1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g38151 ATRD22, RD22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g04221 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16014 PG1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g29822 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g16938 PG1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g20411 PG2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g63303 PG1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene56875.t1 PG2, Aspi01Gene56875 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene56877.t1 PG2, Aspi01Gene56877 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.17G074900.1 PG2, Ceric.17G074900 not classified & original description: pacid=50618228... 0.04 OrthoFinder output from all 47 species
Dac_g00568 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01015390001 ATRD22, RD22 BURP domain-containing protein 3 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder output from all 47 species
LOC_Os08g38810.1 ATRD22, RD22,... BURP domain-containing protein 13 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
LOC_Os09g16010.1 PG2, LOC_Os09g16010 non-catalytic polygalacturonase regulator 0.03 OrthoFinder output from all 47 species
MA_10182290g0010 PG2 BURP domain-containing protein 16 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
MA_161552g0010 PG2 BURP domain-containing protein 16 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
MA_5913418g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Pir_g09461 PG1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g18674 JP630, PG3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g20454 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53934 ATRD22, RD22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g60183 PG2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g062300.3.1 ATRD22, RD22,... BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Spa_g11733 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g12001 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g22747 PG1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05891 PG2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e033843_P001 PG2, Zm00001e033843 non-catalytic polygalacturonase regulator 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR004873 BURP_dom 128 340
No external refs found!