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  5. Tin_g16346

Tin_g16346 (HMA5)


Aliases : HMA5

Description : P1B-type heavy metal cation-transporTing ATPase *(HMA) & original description: none


Gene families : OG0000698 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000698_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g16346
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
Als_g02611 RAN1, HMA7 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.04 OrthoFinder output from all 47 species
Ceric.04G057700.1 RAN1, HMA7,... P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001628.3 HMA5 Solute transport.primary active transport.P-type ATPase... 0.01 OrthoFinder output from all 47 species
Ehy_g29726 HMA5 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.02 OrthoFinder output from all 47 species
Len_g12767 RAN1, HMA7 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.04 OrthoFinder output from all 47 species
Pp3c1_2960V3.1 HMA5, Pp3c1_2960 heavy metal atpase 5 0.02 OrthoFinder output from all 47 species
Pp3s37_140V3.1 HMA5, Pp3s37_140 heavy metal atpase 5 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0010274 hydrotropism IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR006121 HMA_dom 55 112
IPR006121 HMA_dom 131 190
No external refs found!