1. Home
  2. Species
  3. Tectaria incisa
  4. Sequence
  5. Tin_g15580

Tin_g15580 (ATRABE1C, ATRAB8A,...)


Aliases : ATRABE1C, ATRAB8A, ARA-3, RAB8A, ARA3

Description : E-class RAB GTPase & original description: none


Gene families : OG0000945 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000945_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g15580
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
Adi_g020689 ATRABE1D,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g03618 ATRABE1C,... E-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g54700 ATRABE1C,... E-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g04128 ATRABE1D,... E-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g23776 ATRABE1C,... E-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os07g09680.1 ATRABE1E,... E-class RAB GTPase 0.02 OrthoFinder output from all 47 species
Ore_g25496 ATRABE1D,... E-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e011404_P001 ATRABE1C,... E-class RAB GTPase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004602 glutathione peroxidase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0048364 root development IEP HCCA
BP GO:0048367 shoot system development IEP HCCA
BP GO:0048731 system development IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0099402 plant organ development IEP HCCA
InterPro domains Description Start Stop
IPR001806 Small_GTPase 17 178
No external refs found!