Tin_g15448


Description : not classified & original description: none


Gene families : OG0007334 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007334_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g15448
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AT2G36145 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.03 OrthoFinder output from all 47 species
Ala_g13381 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13382 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g00313 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g17979 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.20G026100.1 Ceric.20G026100 not classified & original description: pacid=50567452... 0.03 OrthoFinder output from all 47 species
Dac_g00315 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Dcu_g11894 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23866 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g03162 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01033882001 No alias No description available 0.02 OrthoFinder output from all 47 species
LOC_Os01g64270.1 LOC_Os01g64270 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Lfl_g00256 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_66902g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp1g14530.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g00216 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g01632 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g58597 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015047 No alias not classified & original description: CDS=165-866 0.05 OrthoFinder output from all 47 species
Solyc09g010120.2.1 Solyc09g010120 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e028677_P001 Zm00001e028677 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003725 double-stranded RNA binding IEP HCCA
MF GO:0003747 translation release factor activity IEP HCCA
BP GO:0006415 translational termination IEP HCCA
BP GO:0006810 transport IEP HCCA
MF GO:0008079 translation termination factor activity IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!