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  5. Tin_g14626

Tin_g14626


Description : not classified & original description: none


Gene families : OG0000284 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000284_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g14626

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00178p00058280 evm_27.TU.AmTr_v1... Protein ALP1-like OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Ala_g04460 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11900 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g32883 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g57900 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0084.g039076 No alias chromatin-silencing modulator (ALP1) of PRC2 histone... 0.03 OrthoFinder output from all 47 species
Azfi_s0090.g042762 No alias not classified & original description: CDS=1-1059 0.03 OrthoFinder output from all 47 species
Dac_g16220 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g09074 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g43390 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g09532 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g11867 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004014 adenosylmethionine decarboxylase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006595 polyamine metabolic process IEP HCCA
BP GO:0006596 polyamine biosynthetic process IEP HCCA
BP GO:0006597 spermine biosynthetic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008215 spermine metabolic process IEP HCCA
BP GO:0008216 spermidine metabolic process IEP HCCA
BP GO:0008295 spermidine biosynthetic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009309 amine biosynthetic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0042401 biogenic amine biosynthetic process IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR027806 HARBI1_dom 262 427
No external refs found!