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  5. Tin_g14043

Tin_g14043


Description : not classified & original description: none


Gene families : OG0012030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0012030_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g14043

Target Alias Description ECC score Gene Family Method Actions
Aop_g31384 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.31G060600.1 Ceric.31G060600 not classified & original description: pacid=50574962... 0.03 OrthoFinder output from all 47 species
Spa_g30813 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006729 tetrahydrobiopterin biosynthetic process IEP HCCA
MF GO:0008124 4-alpha-hydroxytetrahydrobiopterin dehydratase activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
BP GO:0034311 diol metabolic process IEP HCCA
BP GO:0034312 diol biosynthetic process IEP HCCA
BP GO:0042558 pteridine-containing compound metabolic process IEP HCCA
BP GO:0042559 pteridine-containing compound biosynthetic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046146 tetrahydrobiopterin metabolic process IEP HCCA
BP GO:0046165 alcohol biosynthetic process IEP HCCA
BP GO:0046173 polyol biosynthetic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 529 576
IPR002885 Pentatricopeptide_repeat 630 677
IPR002885 Pentatricopeptide_repeat 227 273
IPR002885 Pentatricopeptide_repeat 427 475
IPR002885 Pentatricopeptide_repeat 604 628
IPR002885 Pentatricopeptide_repeat 500 525
IPR002885 Pentatricopeptide_repeat 302 325
No external refs found!