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  5. Tin_g13997

Tin_g13997


Description : acTin stability co-factor *(PMIR) & original description: none


Gene families : OG0001272 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001272_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g13997
Cluster HCCA: Cluster_178

Target Alias Description ECC score Gene Family Method Actions
Als_g02621 No alias actin stability co-factor *(PMIR) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g06081 No alias actin stability co-factor *(PMIR) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08736 No alias actin stability co-factor *(PMIR) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0059.g034625 No alias actin stability co-factor *(PMIR) & original... 0.03 OrthoFinder output from all 47 species
Cba_g37984 No alias actin stability co-factor *(PMIR) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.32G018400.1 PMI1, Ceric.32G018400 actin stability co-factor *(PMIR) & original... 0.06 OrthoFinder output from all 47 species
Dac_g12279 No alias actin stability co-factor *(PMIR) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g22530 PMI1 actin stability factor *(PMI1) & original description: none 0.05 OrthoFinder output from all 47 species
Len_g41137 No alias actin stability factor *(PMI1) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12843 No alias actin stability co-factor *(PMIR) & original description: none 0.04 OrthoFinder output from all 47 species
Mp2g25860.1 No alias actin stability factor (PMI1/PMI15). actin stability... 0.02 OrthoFinder output from all 47 species
Msp_g19859 No alias actin stability co-factor *(PMIR) & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g12254 No alias actin stability co-factor *(PMIR) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g41421 No alias actin stability co-factor *(PMIR) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g17949 No alias actin stability co-factor *(PMIR) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e034908_P002 PMI1, Zm00001e034908 actin stability factor (PMI1/PMI15) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR018392 LysM_dom 1228 1265
IPR019448 NT-C2 216 364
No external refs found!