Tin_g13894 (KCS1)

Aliases : KCS1

Description : 3-ketoacyl-CoA synthase *(KCS) & original description: none

Gene families : OG0000066 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Tin_g13894
Cluster	HCCA: Cluster_4

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00002p00268740	KCS11,...	Lipid metabolism.fatty acid synthesis.fatty acid...	0.03	OrthoFinder output from all 47 species
AMTR_s00025p00218730	KCS10, FDH,...	3-ketoacyl-CoA synthase 10 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
AMTR_s00025p00218830	G2, POP1, KCS6,...	Lipid metabolism.fatty acid synthesis.fatty acid...	0.02	OrthoFinder output from all 47 species
AMTR_s00079p00192440	G2, POP1, KCS6,...	Lipid metabolism.fatty acid synthesis.fatty acid...	0.03	OrthoFinder output from all 47 species
AMTR_s00126p00068780	KCS7,...	Lipid metabolism.fatty acid synthesis.fatty acid...	0.02	OrthoFinder output from all 47 species
AT1G68530	G2, POP1, KCS6,...	3-ketoacyl-CoA synthase 6	0.03	OrthoFinder output from all 47 species
AT1G71160	KCS7	3-ketoacyl-CoA synthase 7	0.04	OrthoFinder output from all 47 species
AT3G52160	KCS15	3-ketoacyl-CoA synthase 15	0.04	OrthoFinder output from all 47 species
AT5G49070	KCS21	3-ketoacyl-CoA synthase 21	0.04	OrthoFinder output from all 47 species
Als_g05041	KCS11	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g06821	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g10992	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g32874	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g07226	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g00747	KCS9	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g04445	KCS1	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g37603	KCS1	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g68102	KCS1	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene02098.t1	KCS4, Aspi01Gene02098	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene07651.t1	KCS11, Aspi01Gene07651	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene56751.t1	KCS4, Aspi01Gene56751	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.04	OrthoFinder output from all 47 species
Azfi_s0048.g030519	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: CDS=1-1839	0.04	OrthoFinder output from all 47 species
Cba_g05210	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.13G063100.1	KCS1, Ceric.13G063100	3-ketoacyl-CoA synthase *(KCS) & original description:...	0.02	OrthoFinder output from all 47 species
Ceric.39G044200.1	KCS4, Ceric.39G044200	3-ketoacyl-CoA synthase *(KCS) & original description:...	0.04	OrthoFinder output from all 47 species
Dcu_g02862	KCS11	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g03962	KCS11	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g11603	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g13434	KCS9	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g14441	KCS10, FDH	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g43731	KCS1	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g50625	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g15087	KCS10, FDH	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.04	OrthoFinder output from all 47 species
Dde_g16399	HIC, KCS13	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g22693	KCS10, FDH	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g30267	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g30621	KCS10, FDH	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.05	OrthoFinder output from all 47 species
Dde_g47176	KCS1	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g09927	KCS10, FDH	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g15685	KCS11	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g28211	KCS17	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01022919001	KCS7	Lipid metabolism.fatty acid synthesis.fatty acid...	0.03	OrthoFinder output from all 47 species
GSVIVT01026270001	KCS21	Lipid metabolism.fatty acid synthesis.fatty acid...	0.03	OrthoFinder output from all 47 species
GSVIVT01027424001	KCS1	Lipid metabolism.fatty acid synthesis.fatty acid...	0.02	OrthoFinder output from all 47 species
GSVIVT01034244001	KCS15	Lipid metabolism.fatty acid synthesis.fatty acid...	0.03	OrthoFinder output from all 47 species
Gb_05331	KCS10, FDH	3-ketoacyl-CoA synthase (KCS)	0.03	OrthoFinder output from all 47 species
Gb_15649	KCS9	3-ketoacyl-CoA synthase (KCS)	0.02	OrthoFinder output from all 47 species
Gb_27864	KCS9	3-ketoacyl-CoA synthase (KCS)	0.04	OrthoFinder output from all 47 species
LOC_Os02g49920.1	G2, POP1, KCS6,...	3-ketoacyl-CoA synthase (KCS)	0.02	OrthoFinder output from all 47 species
LOC_Os03g08360.1	KCS10, FDH,...	3-ketoacyl-CoA synthase (KCS)	0.03	OrthoFinder output from all 47 species
LOC_Os10g28060.1	KCS20, LOC_Os10g28060	3-ketoacyl-CoA synthase (KCS)	0.02	OrthoFinder output from all 47 species
Len_g59310	HIC, KCS13	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.02	OrthoFinder output from all 47 species
MA_10428373g0020	KCS11	3-ketoacyl-CoA synthase 1 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
MA_105806g0010	KCS11	3-ketoacyl-CoA synthase (KCS)	0.02	OrthoFinder output from all 47 species
MA_339700g0010	KCS9	3-ketoacyl-CoA synthase (KCS)	0.03	OrthoFinder output from all 47 species
MA_8048664g0010	KCS8	3-ketoacyl-CoA synthase 8 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
MA_9089774g0010	KCS8	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Ppi_g19004	KCS2	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003045	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: CDS=1-1632	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0047.g013491	KCS11	3-ketoacyl-CoA synthase *(KCS) & original description: CDS=1-1617	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0111.g020692	KCS11	3-ketoacyl-CoA synthase *(KCS) & original description: CDS=1-1584	0.03	OrthoFinder output from all 47 species
Smo79947	KCS4	Lipid metabolism.fatty acid synthesis.fatty acid...	0.02	OrthoFinder output from all 47 species
Solyc02g063140.4.1	G2, POP1, KCS6,...	3-ketoacyl-CoA synthase (KCS)	0.04	OrthoFinder output from all 47 species
Solyc02g085870.3.1	G2, POP1, KCS6,...	3-ketoacyl-CoA synthase (KCS)	0.02	OrthoFinder output from all 47 species
Solyc05g013220.2.1	KCS20, Solyc05g013220	3-ketoacyl-CoA synthase (KCS)	0.02	OrthoFinder output from all 47 species
Solyc08g067260.4.1	KCS10, FDH,...	3-ketoacyl-CoA synthase (KCS)	0.04	OrthoFinder output from all 47 species
Solyc10g009240.3.1	KCS1, Solyc10g009240	3-ketoacyl-CoA synthase (KCS)	0.04	OrthoFinder output from all 47 species
Spa_g12343	KCS10, FDH	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g07216	KCS4	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g12411	KCS11	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e004773_P001	KCS20, Zm00001e004773	3-ketoacyl-CoA synthase (KCS)	0.02	OrthoFinder output from all 47 species
Zm00001e012803_P001	KCS20, Zm00001e012803	3-ketoacyl-CoA synthase (KCS)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006631	fatty acid metabolic process	None	Extended
BP	GO:0006633	fatty acid biosynthetic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	acyltransferase activity	None	Extended
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEA	Interproscan
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072330	monocarboxylic acid biosynthetic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003725	double-stranded RNA binding	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006281	DNA repair	IEP	HCCA
BP	GO:0006284	base-excision repair	IEP	HCCA
BP	GO:0006364	rRNA processing	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	HCCA
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	HCCA
BP	GO:0016072	rRNA metabolic process	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
BP	GO:0033554	cellular response to stress	IEP	HCCA
BP	GO:0034470	ncRNA processing	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA
BP	GO:0046483	heterocycle metabolic process	IEP	HCCA
BP	GO:0051716	cellular response to stimulus	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013747	ACP_syn_III_C	417	498
IPR013601	FAE1_typ3_polyketide_synth	115	400

External Links

No external refs found!

Tin_g13894 (KCS1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation