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  5. Tin_g13598

Tin_g13598 (SS2, AtSS2)


Aliases : SS2, AtSS2

Description : EC_2.4 glycosyltransferase & original description: none


Gene families : OG0001429 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001429_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g13598
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AT3G01180 SS2, AtSS2 starch synthase 2 0.04 OrthoFinder output from all 47 species
AT5G24300 SSI1, ATSS1, SSI Glycogen/starch synthases, ADP-glucose type 0.04 OrthoFinder output from all 47 species
Aev_g02461 SS2, AtSS2 EC_2.4 glycosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g23997 SS2, AtSS2 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01011429001 SS2, AtSS2 Carbohydrate metabolism.starch... 0.02 OrthoFinder output from all 47 species
Zm00001e030868_P001 SS2, AtSS2,... starch synthase (SSII) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016757 glycosyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR013534 Starch_synth_cat_dom 279 522
IPR001296 Glyco_trans_1 579 719
No external refs found!