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  5. Tin_g13497

Tin_g13497


Description : regulatory factor *(CURT) of thylakoid grana stacking & original description: none


Gene families : OG0000444 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000444_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g13497
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272260 PTAC8, TMP14,... Protein CURVATURE THYLAKOID 1B, chloroplastic... 0.08 OrthoFinder output from all 47 species
AMTR_s00038p00072170 evm_27.TU.AmTr_v1... Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.02 OrthoFinder output from all 47 species
AT1G52220 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.09 OrthoFinder output from all 47 species
AT2G46820 PTAC8, TMP14, PSI-P, PSAP photosystem I P subunit 0.07 OrthoFinder output from all 47 species
AT4G01150 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.04 OrthoFinder output from all 47 species
Adi_g023582 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.05 OrthoFinder output from all 47 species
Adi_g075200 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.06 OrthoFinder output from all 47 species
Adi_g075201 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.06 OrthoFinder output from all 47 species
Aev_g05103 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.02 OrthoFinder output from all 47 species
Aev_g30164 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Ala_g00922 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.15 OrthoFinder output from all 47 species
Ala_g18790 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Als_g10532 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.05 OrthoFinder output from all 47 species
Als_g27752 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.05 OrthoFinder output from all 47 species
Aob_g16994 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Aob_g35859 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.12 OrthoFinder output from all 47 species
Aop_g49644 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.13 OrthoFinder output from all 47 species
Aop_g70950 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.08 OrthoFinder output from all 47 species
Aspi01Gene23175.t1 Aspi01Gene23175 regulatory factor *(CURT) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene23175.t2 Aspi01Gene23175 regulatory factor *(CURT) of thylakoid grana stacking &... 0.06 OrthoFinder output from all 47 species
Aspi01Gene46854.t1 Aspi01Gene46854 regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Cba_g02293 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Cba_g09234 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Ceric.05G101400.1 Ceric.05G101400 regulatory factor *(CURT) of thylakoid grana stacking &... 0.11 OrthoFinder output from all 47 species
Ceric.08G028200.1 Ceric.08G028200 regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Ceric.25G072200.1 Ceric.25G072200 regulatory factor *(CURT) of thylakoid grana stacking &... 0.12 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000849.28 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g00365 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.13 OrthoFinder output from all 47 species
Dac_g08388 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.12 OrthoFinder output from all 47 species
Dcu_g05104 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Dcu_g10196 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.08 OrthoFinder output from all 47 species
Dcu_g34747 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.12 OrthoFinder output from all 47 species
Dde_g01903 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Dde_g50772 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.07 OrthoFinder output from all 47 species
Ehy_g05318 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.1 OrthoFinder output from all 47 species
Ehy_g19545 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.09 OrthoFinder output from all 47 species
Ehy_g28043 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
GSVIVT01027036001 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.05 OrthoFinder output from all 47 species
GSVIVT01027447001 PTAC8, TMP14, PSI-P, PSAP Protein CURVATURE THYLAKOID 1B, chloroplastic... 0.03 OrthoFinder output from all 47 species
GSVIVT01028749001 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.06 OrthoFinder output from all 47 species
Gb_09245 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.07 OrthoFinder output from all 47 species
LOC_Os01g55570.1 LOC_Os01g55570 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os02g49870.1 LOC_Os02g49870 Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.13 OrthoFinder output from all 47 species
LOC_Os02g52260.1 LOC_Os02g52260 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os06g15400.1 LOC_Os06g15400 Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.15 OrthoFinder output from all 47 species
LOC_Os07g28610.1 PTAC8, TMP14,... Protein CURVATURE THYLAKOID 1B, chloroplastic... 0.09 OrthoFinder output from all 47 species
LOC_Os10g39150.1 PTAC8, TMP14,... Protein CURVATURE THYLAKOID 1B, chloroplastic... 0.02 OrthoFinder output from all 47 species
Len_g15575 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.12 OrthoFinder output from all 47 species
Len_g17885 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.05 OrthoFinder output from all 47 species
Len_g38767 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Len_g57586 PTAC8, TMP14, PSI-P, PSAP regulatory factor *(CURT) of thylakoid grana stacking &... 0.17 OrthoFinder output from all 47 species
Lfl_g19110 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.02 OrthoFinder output from all 47 species
Lfl_g34028 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.08 OrthoFinder output from all 47 species
MA_60075g0010 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.07 OrthoFinder output from all 47 species
MA_734271g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_904218g0010 PTAC8, TMP14, PSI-P, PSAP no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Mp1g25670.1 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.12 OrthoFinder output from all 47 species
Mp6g20800.1 PTAC8, TMP14, PSI-P, PSAP Protein CURVATURE THYLAKOID 1B, chloroplastic... 0.1 OrthoFinder output from all 47 species
Mp6g20860.1 No alias Protein CURVATURE THYLAKOID 1C, chloroplastic... 0.09 OrthoFinder output from all 47 species
Msp_g05299 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.08 OrthoFinder output from all 47 species
Msp_g40930 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Nbi_g28257 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.11 OrthoFinder output from all 47 species
Nbi_g31183 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Ore_g09525 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.05 OrthoFinder output from all 47 species
Ore_g27720 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.05 OrthoFinder output from all 47 species
Pir_g00176 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.08 OrthoFinder output from all 47 species
Pir_g00327 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.05 OrthoFinder output from all 47 species
Pir_g48383 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.1 OrthoFinder output from all 47 species
Pnu_g11391 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Pnu_g16623 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Pnu_g19759 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Pp3c16_11960V3.1 Pp3c16_11960 No annotation 0.02 OrthoFinder output from all 47 species
Pp3c8_17810V3.1 Pp3c8_17810 No annotation 0.01 OrthoFinder output from all 47 species
Ppi_g12227 PTAC8, TMP14, PSI-P, PSAP regulatory factor *(CURT) of thylakoid grana stacking &... 0.02 OrthoFinder output from all 47 species
Ppi_g18345 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007392 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Sam_g28663 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.02 OrthoFinder output from all 47 species
Sam_g38625 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.13 OrthoFinder output from all 47 species
Smo49217 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.04 OrthoFinder output from all 47 species
Solyc01g095430.3.1 Solyc01g095430 Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.12 OrthoFinder output from all 47 species
Solyc06g066620.4.1 Solyc06g066620 Protein CURVATURE THYLAKOID 1C, chloroplastic... 0.05 OrthoFinder output from all 47 species
Solyc10g005050.3.1 PTAC8, TMP14,... Protein CURVATURE THYLAKOID 1B, chloroplastic... 0.07 OrthoFinder output from all 47 species
Solyc10g011770.4.1 Solyc10g011770 Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.03 OrthoFinder output from all 47 species
Solyc11g010480.2.1 Solyc11g010480 Protein CURVATURE THYLAKOID 1D, chloroplastic... 0.03 OrthoFinder output from all 47 species
Spa_g05035 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.09 OrthoFinder output from all 47 species
Spa_g06785 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Spa_g09664 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.05 OrthoFinder output from all 47 species
Spa_g24039 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.06 OrthoFinder output from all 47 species
Zm00001e000193_P001 Zm00001e000193 Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.11 OrthoFinder output from all 47 species
Zm00001e002212_P002 PTAC8, TMP14,... Protein CURVATURE THYLAKOID 1B, chloroplastic... 0.03 OrthoFinder output from all 47 species
Zm00001e019748_P001 Zm00001e019748 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e023473_P001 Zm00001e023473 Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.09 OrthoFinder output from all 47 species
Zm00001e029009_P001 Zm00001e029009 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e030948_P002 Zm00001e030948 Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.11 OrthoFinder output from all 47 species
Zm00001e034870_P002 PTAC8, TMP14,... no hits & (original description: none) 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
BP GO:0010206 photosystem II repair IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0030091 protein repair IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR025564 CAAD_dom 85 168
No external refs found!