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  5. Tin_g13454

Tin_g13454


Description : not classified & original description: none


Gene families : OG0007313 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007313_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g13454

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene54798.t2 Aspi01Gene54798 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g25057 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e041104_P001 Zm00001e041104 ATP-dependent DNA helicase Q-like 5 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006260 DNA replication IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
BP GO:0017038 protein import IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 661 824
IPR001650 Helicase_C 861 968
IPR021110 DNA_rep_checkpnt_protein 12 122
IPR003034 SAP_dom 398 429
No external refs found!