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  5. Tin_g12949

Tin_g12949 (SECA1, AtcpSecA, AGY1)


Aliases : SECA1, AtcpSecA, AGY1

Description : component *(SecA1) of thylakoid membrane Sec1 translocation system & original description: none


Gene families : OG0001541 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001541_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g12949
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
AT1G21650 SECA2 Preprotein translocase SecA family protein 0.05 OrthoFinder output from all 47 species
Adi_g007063 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.02 OrthoFinder output from all 47 species
Adi_g021940 SECA2 component *(SecA2) of inner envelope Sec2 post-import... 0.04 OrthoFinder output from all 47 species
Ala_g19639 SECA2 component *(SecA2) of inner envelope Sec2 post-import... 0.04 OrthoFinder output from all 47 species
Aob_g02321 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.03 OrthoFinder output from all 47 species
Aop_g60479 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.03 OrthoFinder output from all 47 species
Aspi01Gene24353.t1 SECA1, AtcpSecA,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0155.g053632 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.02 OrthoFinder output from all 47 species
Cre12.g517900 SECA1, AtcpSecA, AGY1 Protein translocation.chloroplast.thylakoid membrane... 0.01 OrthoFinder output from all 47 species
LOC_Os01g21820.1 SECA1, AtcpSecA,... component SecA2 of inner envelope Sec2 post-import... 0.02 OrthoFinder output from all 47 species
LOC_Os11g08980.1 SECA2, LOC_Os11g08980 Protein translocase subunit SECA2, chloroplastic... 0.05 OrthoFinder output from all 47 species
Len_g29022 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.07 OrthoFinder output from all 47 species
Len_g36322 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.03 OrthoFinder output from all 47 species
Lfl_g02357 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.02 OrthoFinder output from all 47 species
Msp_g23935 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.03 OrthoFinder output from all 47 species
Msp_g23936 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.03 OrthoFinder output from all 47 species
Nbi_g30518 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.02 OrthoFinder output from all 47 species
Sam_g15982 No alias component *(SecA1) of thylakoid membrane Sec1... 0.03 OrthoFinder output from all 47 species
Smo176627 SECA2 Protein translocation.chloroplast.inner envelope Sec2... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0017038 protein import IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011130 SecA_preprotein_X-link_dom 307 413
IPR011115 SecA_DEAD 92 457
IPR011116 SecA_Wing/Scaffold 763 974
No external refs found!