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  5. Tin_g12932

Tin_g12932


Description : E4 polyubiquiTination factor *(UAP) & original description: none


Gene families : OG0001079 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001079_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g12932
Cluster HCCA: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
Ceric.23G080900.1 Ceric.23G080900 E4 polyubiquitination factor *(UAP) & original... 0.03 OrthoFinder output from all 47 species
Cre13.g590650 No alias No description available 0.01 OrthoFinder output from all 47 species
Ehy_g04951 No alias E4 polyubiquitination factor *(UAP) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01032424001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os05g07730.1 LOC_Os05g07730 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g47564 No alias E4 polyubiquitination factor *(UAP) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g16866 No alias E4 polyubiquitination factor *(UAP) & original description: none 0.03 OrthoFinder output from all 47 species
Mp5g12800.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Ppi_g54447 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo446314 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc07g053990.4.1 Solyc07g053990 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g49436 No alias E4 polyubiquitination factor *(UAP) & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR010820 DUF1421 716 758
No external refs found!