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  5. Tin_g12666

Tin_g12666 (BOP1)


Aliases : BOP1

Description : not classified & original description: none


Gene families : OG0001046 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001046_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g12666
Cluster HCCA: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00112510 ATNPR3, NPR3,... Phytohormones.salicylic acid.perception and signal... 0.03 OrthoFinder output from all 47 species
AMTR_s00053p00115370 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bZIP... 0.02 OrthoFinder output from all 47 species
Aev_g11585 BOP2 transcriptional co-activator *(BOP) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04509 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g04510 BOP1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g05458 BOP2 transcriptional co-activator *(BOP) & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g48776 BOP1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g18109 BOP2 transcriptional co-activator *(BOP) & original description: none 0.03 OrthoFinder output from all 47 species
Mp1g02380.1 ATNPR3, NPR3 Regulatory protein NPR3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Ore_g10052 BOP1 transcriptional co-activator *(BOP) & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g62749 BOP2 transcriptional co-activator *(BOP) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g51802 BOP2 transcriptional co-activator *(BOP) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e018649_P001 BOP2, Zm00001e018649 transcriptional co-activator (BOP) 0.04 OrthoFinder output from all 47 species
Zm00001e028331_P001 BOP2, Zm00001e028331 transcriptional co-activator (BOP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
InterPro domains Description Start Stop
IPR002110 Ankyrin_rpt 290 369
IPR000210 BTB/POZ_dom 28 116
No external refs found!