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Tin_g12583 (PHIP1)


Aliases : PHIP1

Description : phragmoplasTin-interacTing factor *(PHIP1) & original description: none


Gene families : OG0002968 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002968_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g12583

Target Alias Description ECC score Gene Family Method Actions
AT3G55340 PHIP1 phragmoplastin interacting protein 1 0.02 OrthoFinder output from all 47 species
Aob_g05162 PHIP1 phragmoplastin-interacting factor *(PHIP1) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g18046 ATU2AF65A phragmoplastin-interacting factor *(PHIP1) & original... 0.03 OrthoFinder output from all 47 species
Mp3g24090.1 PHIP1 28 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... 0.03 OrthoFinder output from all 47 species
Ppi_g13274 PHIP1 phragmoplastin-interacting factor *(PHIP1) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0004576 oligosaccharyl transferase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
BP GO:0030488 tRNA methylation IEP HCCA
CC GO:0031515 tRNA (m1A) methyltransferase complex IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
CC GO:0034708 methyltransferase complex IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
CC GO:0043527 tRNA methyltransferase complex IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR001878 Znf_CCHC 347 363
IPR000504 RRM_dom 157 226
IPR000504 RRM_dom 257 322
No external refs found!