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  5. Tin_g12011

Tin_g12011 (WIP5)


Aliases : WIP5

Description : C2H2 subclass WIP transcription factor & original description: none


Gene families : OG0001814 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001814_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g12011

Target Alias Description ECC score Gene Family Method Actions
LOC_Os05g37190.1 WIP5, LOC_Os05g37190 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
MA_4130g0010 WIP5 C2H2 zinc finger transcription factor 0.01 OrthoFinder output from all 47 species
Mp1g09500.1 WIP2, NTT C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Pir_g58693 WIP5 C2H2 subclass WIP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Solyc03g059270.4.1 WIP2, NTT, Solyc03g059270 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e009663_P001 WIP6, DOT5,... C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e034518_P001 WIP2, NTT, Zm00001e034518 C2H2 zinc finger transcription factor 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003779 actin binding IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!