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  5. Tin_g11822

Tin_g11822


Description : ubiquiTin adaptor protein *(TOL) & original description: none


Gene families : OG0000393 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000393_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g11822

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00118270 evm_27.TU.AmTr_v1... Vesicle trafficking.endomembrane trafficking.protein... 0.04 OrthoFinder output from all 47 species
Aev_g49155 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g03896 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g06569 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.16G081800.1 Ceric.16G081800 ubiquitin adaptor protein *(TOL) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.35G060000.1 Ceric.35G060000 ubiquitin adaptor protein *(TOL) & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g06382 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g17236 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01022425001 No alias Vesicle trafficking.endomembrane trafficking.protein... 0.03 OrthoFinder output from all 47 species
Gb_06800 No alias TOM endomembrane trafficking associated protein 0.03 OrthoFinder output from all 47 species
Pir_g01965 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10195 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32852 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc09g014790.4.1 Solyc09g014790 TOM endomembrane trafficking associated protein 0.05 OrthoFinder output from all 47 species
Zm00001e014210_P001 Zm00001e014210 TOM endomembrane trafficking associated protein 0.03 OrthoFinder output from all 47 species
Zm00001e021369_P002 Zm00001e021369 TOM endomembrane trafficking associated protein 0.05 OrthoFinder output from all 47 species
Zm00001e029150_P001 Zm00001e029150 TOM endomembrane trafficking associated protein 0.02 OrthoFinder output from all 47 species
Zm00001e031902_P001 Zm00001e031902 TOM endomembrane trafficking associated protein 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0035091 phosphatidylinositol binding IEA Interproscan
MF GO:0043130 ubiquitin binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0000287 magnesium ion binding IEP HCCA
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP HCCA
MF GO:0003972 RNA ligase (ATP) activity IEP HCCA
MF GO:0004743 pyruvate kinase activity IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
MF GO:0008452 RNA ligase activity IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0030955 potassium ion binding IEP HCCA
MF GO:0031420 alkali metal ion binding IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002014 VHS_dom 4 128
IPR004152 GAT_dom 209 284
No external refs found!