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  5. Tin_g11582

Tin_g11582 (MSL4)


Aliases : MSL4

Description : mechanosensitive ion channel *(MSL) & original description: none


Gene families : OG0000689 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000689_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g11582
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
AT2G17010 No alias Mechanosensitive ion channel family protein 0.03 OrthoFinder output from all 47 species
AT5G12080 MSL10, ATMSL10 mechanosensitive channel of small conductance-like 10 0.04 OrthoFinder output from all 47 species
Als_g01071 MSL4 mechanosensitive ion channel *(MSL) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g09653 No alias mechanosensitive ion channel *(MSL) & original description: none 0.07 OrthoFinder output from all 47 species
Azfi_s0028.g023959 MSL5 mechanosensitive ion channel *(MSL) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0068.g036428 MSL5 mechanosensitive ion channel *(MSL) & original... 0.03 OrthoFinder output from all 47 species
Cba_g03379 MSL5 mechanosensitive ion channel *(MSL) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.02G100500.1 MSL5, Ceric.02G100500 mechanosensitive ion channel *(MSL) & original... 0.04 OrthoFinder output from all 47 species
Ceric.02G100600.1 MSL6, Ceric.02G100600 mechanosensitive ion channel *(MSL) & original... 0.08 OrthoFinder output from all 47 species
Ceric.22G069800.1 MSL5, Ceric.22G069800 mechanosensitive ion channel *(MSL) & original... 0.05 OrthoFinder output from all 47 species
Ceric.35G012600.1 MSL6, Ceric.35G012600 mechanosensitive ion channel *(MSL) & original... 0.03 OrthoFinder output from all 47 species
Dac_g12993 MSL6 mechanosensitive ion channel *(MSL) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g11793 MSL6 mechanosensitive ion channel *(MSL) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008726001 No alias Solute transport.channels.MSL mechanosensitive ion channel 0.03 OrthoFinder output from all 47 species
GSVIVT01035448001 MSL10, ATMSL10 Solute transport.channels.MSL mechanosensitive ion channel 0.04 OrthoFinder output from all 47 species
Lfl_g28112 MSL6 mechanosensitive ion channel *(MSL) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g15988 MSL5 mechanosensitive ion channel *(MSL) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g28577 MSL4 mechanosensitive ion channel *(MSL) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007089 MSL4 mechanosensitive ion channel *(MSL) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015319 MSL5 mechanosensitive ion channel *(MSL) & original... 0.03 OrthoFinder output from all 47 species
Sam_g47206 No alias mechanosensitive ion channel *(MSL) & original description: none 0.05 OrthoFinder output from all 47 species
Solyc08g061980.4.1 MSL10, ATMSL10,... mechanosensitive ion channel (MSL) 0.04 OrthoFinder output from all 47 species
Spa_g10135 MSL5 mechanosensitive ion channel *(MSL) & original description: none 0.09 OrthoFinder output from all 47 species
Spa_g10758 MSL4 mechanosensitive ion channel *(MSL) & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR006685 MscS_channel 690 893
No external refs found!