1. Home
  2. Species
  3. Tectaria incisa
  4. Sequence
  5. Tin_g11231

Tin_g11231


Description : component *(CAP-D2A) of condensin I complex & original description: none


Gene families : OG0004821 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004821_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g11231
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00063p00018970 evm_27.TU.AmTr_v1... Cell cycle.mitosis and meiosis.chromatin... 0.11 OrthoFinder output from all 47 species
AT3G57060 No alias binding 0.1 OrthoFinder output from all 47 species
Aev_g21439 No alias component *(CAP-D2A) of condensin I complex & original... 0.02 OrthoFinder output from all 47 species
Ala_g26011 No alias component *(CAP-D2A) of condensin I complex & original... 0.15 OrthoFinder output from all 47 species
Als_g16422 No alias component *(CAP-D2A) of condensin I complex & original... 0.13 OrthoFinder output from all 47 species
Aop_g66013 No alias component *(CAP-D2A) of condensin I complex & original... 0.21 OrthoFinder output from all 47 species
Aspi01Gene72377.t1 Aspi01Gene72377 component *(CAP-D2A) of condensin I complex & original... 0.14 OrthoFinder output from all 47 species
Azfi_s0250.g060200 No alias component *(CAP-D2A) of condensin I complex & original... 0.03 OrthoFinder output from all 47 species
Ceric.08G005100.1 Ceric.08G005100 component *(CAP-D2A) of condensin I complex & original... 0.16 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021070.118 No alias Cell cycle.mitosis and meiosis.chromatin... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021070.119 No alias Cell cycle.mitosis and meiosis.chromatin... 0.04 OrthoFinder output from all 47 species
Cre10.g432500 No alias Cell cycle.mitosis and meiosis.chromatin... 0.04 OrthoFinder output from all 47 species
Dcu_g06519 No alias component *(CAP-D2A) of condensin I complex & original... 0.05 OrthoFinder output from all 47 species
GSVIVT01033598001 No alias Cell cycle.mitosis and meiosis.chromatin... 0.16 OrthoFinder output from all 47 species
Gb_21478 No alias component CAP-D2A of condensin I complex 0.17 OrthoFinder output from all 47 species
LOC_Os07g46540.1 LOC_Os07g46540 component CAP-D2A of condensin I complex 0.14 OrthoFinder output from all 47 species
Len_g59596 No alias component *(CAP-D2A) of condensin I complex & original... 0.06 OrthoFinder output from all 47 species
Lfl_g38611 No alias component *(CAP-D2A) of condensin I complex & original... 0.07 OrthoFinder output from all 47 species
MA_10427588g0010 No alias component CAP-D2A of condensin I complex 0.13 OrthoFinder output from all 47 species
MA_10427588g0020 No alias component CAP-D2A of condensin I complex. serine carboxypeptidase 0.13 OrthoFinder output from all 47 species
Mp3g03650.1 No alias component CAP-D2A of condensin I complex 0.12 OrthoFinder output from all 47 species
Msp_g14231 No alias component *(CAP-D2A) of condensin I complex & original... 0.2 OrthoFinder output from all 47 species
Nbi_g04469 No alias component *(CAP-D2A) of condensin I complex & original... 0.21 OrthoFinder output from all 47 species
Ppi_g31657 No alias component *(CAP-D2A) of condensin I complex & original... 0.07 OrthoFinder output from all 47 species
Spa_g41134 No alias component *(CAP-D2A) of condensin I complex & original... 0.2 OrthoFinder output from all 47 species
Zm00001e035766_P001 Zm00001e035766 component CAP-D2A of condensin I complex 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR024324 Condensin_cplx_su1_N 88 257
IPR032682 Cnd1_C 1008 1168
No external refs found!