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  5. Tin_g10995

Tin_g10995


Description : not classified & original description: none


Gene families : OG0001358 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001358_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g10995
Cluster HCCA: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0028.g023814 No alias not classified & original description: CDS=173-1201 0.04 OrthoFinder output from all 47 species
Ceric.39G003100.1 Ceric.39G003100 not classified & original description: pacid=50582359... 0.04 OrthoFinder output from all 47 species
Len_g20147 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Lfl_g40053 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_90368g0010 No alias VAN3-binding protein OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g12084 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15899 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013666 PH_pln 374 477
IPR008546 VAN3-bd-like_auxin_canal 54 342
No external refs found!