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  5. Tin_g10684

Tin_g10684


Description : not classified & original description: none


Gene families : OG0000234 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000234_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g10684

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00218970 evm_27.TU.AmTr_v1... FT-interacting protein 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G04150 No alias C2 calcium/lipid-binding plant phosphoribosyltransferase... 0.04 OrthoFinder output from all 47 species
AT5G06850 No alias C2 calcium/lipid-binding plant phosphoribosyltransferase... 0.04 OrthoFinder output from all 47 species
AT5G17980 No alias C2 calcium/lipid-binding plant phosphoribosyltransferase... 0.02 OrthoFinder output from all 47 species
AT5G48060 No alias C2 calcium/lipid-binding plant phosphoribosyltransferase... 0.03 OrthoFinder output from all 47 species
Adi_g084659 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g11837 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g10581 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.02G047000.1 Ceric.02G047000 not classified & original description: pacid=50586228... 0.04 OrthoFinder output from all 47 species
Ceric.38G019300.1 Ceric.38G019300 not classified & original description: pacid=50580085... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020563.73 No alias No description available 0.02 OrthoFinder output from all 47 species
LOC_Os06g41090.1 LOC_Os06g41090 no description available(sp|q69t22|ftip1_orysj : 1449.0) 0.04 OrthoFinder output from all 47 species
MA_3135258g0010 QKY no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_5279581g0010 No alias no description available(sp|q9m2r0|ftip3_arath : 296.0) 0.02 OrthoFinder output from all 47 species
MA_5534226g0010 No alias no description available(sp|q60ew9|ftip7_orysj : 184.0) 0.04 OrthoFinder output from all 47 species
MA_7640327g0010 QKY Protein QUIRKY OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_94243g0010 No alias no description available(sp|q9m2r0|ftip3_arath : 850.0) 0.03 OrthoFinder output from all 47 species
Pir_g26805 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g58936 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Solyc01g086720.3.1 Solyc01g086720 FT-interacting protein 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc03g077920.1.1 Solyc03g077920 FT-interacting protein 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc03g113190.1.1 QKY, Solyc03g113190 Protein QUIRKY OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc10g080420.3.1 Solyc10g080420 no description available(sp|q9m2r0|ftip3_arath : 846.0) 0.02 OrthoFinder output from all 47 species
Spa_g20897 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e027805_P001 QKY, Zm00001e027805 Protein QUIRKY OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e032879_P001 Zm00001e032879 Protein QUIRKY OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0035673 oligopeptide transmembrane transporter activity IEP HCCA
MF GO:0042887 amide transmembrane transporter activity IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:1904680 peptide transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR013583 PRibTrfase_C 1034 1188
IPR000008 C2_dom 619 726
IPR000008 C2_dom 460 554
IPR000008 C2_dom 5 110
IPR000008 C2_dom 776 889
No external refs found!