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  5. Tin_g10297

Tin_g10297


Description : not classified & original description: none


Gene families : OG0005532 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005532_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g10297

Target Alias Description ECC score Gene Family Method Actions
Adi_g107386 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01027547001 No alias BEACH domain-containing protein C2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Len_g29845 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp6g16270.1 No alias BEACH domain-containing protein C2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Ore_g16690 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g08777 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo60006 No alias BEACH domain-containing protein C2 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Solyc01g094050.1.1 Solyc01g094050 BEACH domain-containing protein C2 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc01g094060.4.1 Solyc01g094060 BEACH domain-containing protein C2 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e007294_P001 Zm00001e007294 BEACH domain-containing protein C2 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0017025 TBP-class protein binding IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140296 general transcription initiation factor binding IEP HCCA
InterPro domains Description Start Stop
IPR031570 NBEA/BDCP_DUF4704 917 1230
IPR031570 NBEA/BDCP_DUF4704 1423 1565
IPR046851 NBCH_WD40 2941 3166
IPR000409 BEACH_dom 2542 2818
IPR023362 PH-BEACH_dom 2416 2513
No external refs found!