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  5. Tin_g10246

Tin_g10246 (RUB1, ATRUB1, NEDD8)


Aliases : RUB1, ATRUB1, NEDD8

Description : RUB ubiquiTin-fold protein & original description: none


Gene families : OG0000054 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g10246

Target Alias Description ECC score Gene Family Method Actions
MA_115394g0010 UBQ11 ubiquitin-fold protein (UBQ) 0.03 OrthoFinder output from all 47 species
Pir_g04702 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g21361 No alias component *(eL40) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Zm00001e034164_P001 RUB1, ATRUB1,... ubiquitin-fold protein (RUB) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
InterPro domains Description Start Stop
IPR000626 Ubiquitin-like_dom 79 150
IPR000626 Ubiquitin-like_dom 3 74
No external refs found!