1. Home
  2. Species
  3. Tectaria incisa
  4. Sequence
  5. Tin_g10133

Tin_g10133 (RHF2A)


Aliases : RHF2A

Description : regulatory E3 ubiquiTin ligase *(RHF) & original description: none


Gene families : OG0001882 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001882_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g10133
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
Adi_g060868 RHF2A regulatory E3 ubiquitin ligase *(RHF) & original... 0.03 OrthoFinder output from all 47 species
Als_g07257 RHF2A regulatory E3 ubiquitin ligase *(RHF) & original... 0.03 OrthoFinder output from all 47 species
Als_g32008 RHF2A regulatory E3 ubiquitin ligase *(RHF) & original... 0.02 OrthoFinder output from all 47 species
Azfi_s4053.g117827 RHF2A regulatory E3 ubiquitin ligase *(RHF) & original... 0.03 OrthoFinder output from all 47 species
Dac_g09985 RHF2A regulatory E3 ubiquitin ligase *(RHF) & original... 0.03 OrthoFinder output from all 47 species
Dde_g01414 RHF2A regulatory E3 ubiquitin ligase *(RHF) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g00852 RHF2A regulatory E3 ubiquitin ligase *(RHF) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g01229 RHF2A regulatory E3 ubiquitin ligase *(RHF) & original... 0.02 OrthoFinder output from all 47 species
Gb_16911 RHF2A E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os11g36430.3 RHF2A, LOC_Os11g36430 E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_216069g0010 RHF2A no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Msp_g00612 RHF2A regulatory E3 ubiquitin ligase *(RHF) & original... 0.04 OrthoFinder output from all 47 species
Msp_g11713 RHF2A regulatory E3 ubiquitin ligase *(RHF) & original... 0.03 OrthoFinder output from all 47 species
Msp_g11714 RHF2A regulatory E3 ubiquitin ligase *(RHF) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g15911 RHF2A regulatory E3 ubiquitin ligase *(RHF) & original... 0.04 OrthoFinder output from all 47 species
Solyc06g073880.3.1 RHF2A, Solyc06g073880 E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc10g081710.2.1 RHF2A, Solyc10g081710 E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000097 sulfur amino acid biosynthetic process IEP HCCA
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0006535 cysteine biosynthetic process from serine IEP HCCA
BP GO:0006563 L-serine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0009001 serine O-acetyltransferase activity IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009070 serine family amino acid biosynthetic process IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016412 serine O-acyltransferase activity IEP HCCA
MF GO:0016413 O-acetyltransferase activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP HCCA
BP GO:0019344 cysteine biosynthetic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0045927 positive regulation of growth IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 172 213
No external refs found!