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  5. Tin_g09459

Tin_g09459


Description : not classified & original description: none


Gene families : OG0000811 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000811_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g09459

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00209400 evm_27.TU.AmTr_v1... CASP-like protein 2C1 OS=Sorghum bicolor 0.02 OrthoFinder output from all 47 species
Adi_g031098 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g115376 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g17065 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g06538 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g20279 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0034.g025274 No alias not classified & original description: CDS=467-1165 0.04 OrthoFinder output from all 47 species
Ceric.02G018700.1 Ceric.02G018700 not classified & original description: pacid=50584078... 0.04 OrthoFinder output from all 47 species
Ceric.23G007600.1 Ceric.23G007600 not classified & original description: pacid=50611535... 0.03 OrthoFinder output from all 47 species
Dac_g09088 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g45174 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g46991 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g04283 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os02g08110.1 LOC_Os02g08110 CASP-like protein 2C2 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
LOC_Os06g44610.1 LOC_Os06g44610 CASP-like protein 2C1 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Len_g15691 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10431555g0010 No alias CASP-like protein 2A3 OS=Picea sitchensis... 0.04 OrthoFinder output from all 47 species
Mp5g15430.1 No alias CASP-like protein 2U1 OS=Marchantia polymorpha... 0.03 OrthoFinder output from all 47 species
Msp_g06627 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g15117 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g28679 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g39866 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g41718 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29949 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29950 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g056040.3.1 Solyc07g056040 CASP-like protein 2A1 OS=Vitis vinifera... 0.02 OrthoFinder output from all 47 species
Spa_g00241 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g06771 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g16154 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e040663_P001 Zm00001e040663 CASP-like protein 2A2 OS=Zea mays (sp|b6sr79|cspl7_maize : 271.0) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP HCCA
MF GO:0004097 catechol oxidase activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP HCCA
BP GO:0015780 nucleotide-sugar transmembrane transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
BP GO:1901264 carbohydrate derivative transport IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR006702 CASP_dom 43 195
No external refs found!