Tin_g08945 (HAP1, MEE63, MAGO)

Aliases : HAP1, MEE63, MAGO

Description : component *(Magoh) of RNA quality control Exon Junction complex & original description: none

Gene families : OG0003958 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003958_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Tin_g08945
Cluster	HCCA: Cluster_51

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00121p00130180	HAP1, MEE63,...	RNA processing.RNA quality control Exon Junction complex...	0.04	OrthoFinder output from all 47 species
AT1G02140	HAP1, MEE63, MAGO	mago nashi family protein	0.01	OrthoFinder output from all 47 species
Ala_g04475	HAP1, MEE63, MAGO	component *(Magoh) of RNA quality control Exon Junction...	0.04	OrthoFinder output from all 47 species
Aob_g08074	HAP1, MEE63, MAGO	component *(Magoh) of RNA quality control Exon Junction...	0.03	OrthoFinder output from all 47 species
Aspi01Gene30613.t1	HAP1, MEE63,...	component *(Magoh) of RNA quality control Exon Junction...	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000944.21	HAP1, MEE63, MAGO	RNA processing.RNA quality control Exon Junction complex...	0.02	OrthoFinder output from all 47 species
Cre09.g392692	HAP1, MEE63, MAGO	RNA processing.RNA quality control Exon Junction complex...	0.04	OrthoFinder output from all 47 species
Dac_g03060	HAP1, MEE63, MAGO	component *(Magoh) of RNA quality control Exon Junction...	0.03	OrthoFinder output from all 47 species
Dcu_g06707	HAP1, MEE63, MAGO	component *(Magoh) of RNA quality control Exon Junction...	0.03	OrthoFinder output from all 47 species
Dcu_g07294	HAP1, MEE63, MAGO	component *(Magoh) of RNA quality control Exon Junction...	0.07	OrthoFinder output from all 47 species
GSVIVT01013876001	HAP1, MEE63, MAGO	RNA processing.RNA quality control Exon Junction complex...	0.04	OrthoFinder output from all 47 species
LOC_Os08g01660.1	HAP1, MEE63,...	component Magoh of RNA quality control Exon Junction complex	0.03	OrthoFinder output from all 47 species
LOC_Os12g18880.1	HAP1, MEE63,...	component Magoh of RNA quality control Exon Junction complex	0.04	OrthoFinder output from all 47 species
MA_10426266g0010	HAP1, MEE63, MAGO	component Magoh of RNA quality control Exon Junction complex	0.03	OrthoFinder output from all 47 species
Nbi_g24780	HAP1, MEE63, MAGO	component *(Magoh) of RNA quality control Exon Junction...	0.05	OrthoFinder output from all 47 species
Pp3c2_21720V3.1	HAP1, MEE63,...	mago nashi family protein	0.02	OrthoFinder output from all 47 species
Spa_g09540	HAP1, MEE63, MAGO	component *(Magoh) of RNA quality control Exon Junction...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008380	RNA splicing	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
CC	GO:0035145	exon-exon junction complex	IEA	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
CC	GO:0140513	nuclear protein-containing complex	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003735	structural constituent of ribosome	IEP	HCCA
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	HCCA
MF	GO:0005198	structural molecule activity	IEP	HCCA
CC	GO:0005840	ribosome	IEP	HCCA
BP	GO:0006351	DNA-templated transcription	IEP	HCCA
BP	GO:0006412	translation	IEP	HCCA
BP	GO:0006518	peptide metabolic process	IEP	HCCA
BP	GO:0006605	protein targeting	IEP	HCCA
BP	GO:0006886	intracellular protein transport	IEP	HCCA
BP	GO:0009058	biosynthetic process	IEP	HCCA
BP	GO:0009059	macromolecule biosynthetic process	IEP	HCCA
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	HCCA
MF	GO:0016859	cis-trans isomerase activity	IEP	HCCA
BP	GO:0032774	RNA biosynthetic process	IEP	HCCA
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	HCCA
BP	GO:0043043	peptide biosynthetic process	IEP	HCCA
CC	GO:0043226	organelle	IEP	HCCA
CC	GO:0043228	non-membrane-bounded organelle	IEP	HCCA
CC	GO:0043229	intracellular organelle	IEP	HCCA
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	HCCA
BP	GO:0043603	amide metabolic process	IEP	HCCA
BP	GO:0043604	amide biosynthetic process	IEP	HCCA
BP	GO:0044249	cellular biosynthetic process	IEP	HCCA
BP	GO:0044260	cellular macromolecule metabolic process	IEP	HCCA
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	HCCA
BP	GO:0097659	nucleic acid-templated transcription	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	HCCA
BP	GO:1901576	organic substance biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004023	Mago_nashi	9	150

External Links

No external refs found!

Tin_g08945 (HAP1, MEE63, MAGO)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation