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  5. Tin_g08431

Tin_g08431 (PRT6)


Aliases : PRT6

Description : type-I-residues E3 ubiquiTin ligase *(PRT6) & original description: none


Gene families : OG0003565 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003565_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g08431

Target Alias Description ECC score Gene Family Method Actions
Aev_g44805 PRT6 type-I-residues E3 ubiquitin ligase *(PRT6) & original... 0.03 OrthoFinder output from all 47 species
Ala_g11391 PRT6 type-I-residues E3 ubiquitin ligase *(PRT6) & original... 0.03 OrthoFinder output from all 47 species
Cre02.g089237 PRT6 Protein degradation.N-end rule pathway of targeted... 0.02 OrthoFinder output from all 47 species
MA_10429079g0010 PRT6 E3 ubiquitin-protein ligase PRT6 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_767141g0010 PRT6 E3 ubiquitin-protein ligase PRT6 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp7g16320.1 PRT6 type-I-residues E3 ubiquitin ligase (PRT6) 0.03 OrthoFinder output from all 47 species
Smo438209 PRT6 Protein degradation.N-end rule pathway of targeted... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019781 NEDD8 activating enzyme activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0045116 protein neddylation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR044046 E3_ligase_UBR-like_C 1661 2137
IPR003126 Znf_UBR 123 189
No external refs found!