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  5. Tin_g08113

Tin_g08113 (LKP1, ADO1, ZTL, FKL2)


Aliases : LKP1, ADO1, ZTL, FKL2

Description : substrate adaptor of SCF E3 ubiquiTin ligase *(ADO) & original description: none


Gene families : OG0002140 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002140_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g08113

Target Alias Description ECC score Gene Family Method Actions
Als_g01025 LKP1, ADO1, ZTL, FKL2 substrate adaptor of SCF E3 ubiquitin ligase *(ADO) &... 0.03 OrthoFinder output from all 47 species
Dcu_g01627 LKP1, ADO1, ZTL, FKL2 substrate adaptor of SCF E3 ubiquitin ligase *(ADO) &... 0.02 OrthoFinder output from all 47 species
LOC_Os11g34460.1 ADO3, FKF1,... component ADO of SCF E3 ubiquitin ligase complex.... 0.02 OrthoFinder output from all 47 species
Len_g04322 LKP1, ADO1, ZTL, FKL2 substrate adaptor of SCF E3 ubiquitin ligase *(ADO) &... 0.05 OrthoFinder output from all 47 species
Mp3g14360.1 LKP1, ADO1, ZTL, FKL2 component ADO of SCF E3 ubiquitin ligase complex.... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0086.g018388 LKP1, ADO1, ZTL, FKL2 substrate adaptor of SCF E3 ubiquitin ligase *(ADO) &... 0.03 OrthoFinder output from all 47 species
Sam_g10166 No alias substrate adaptor of SCF E3 ubiquitin ligase *(ADO) &... 0.03 OrthoFinder output from all 47 species
Spa_g04711 ADO3, FKF1 substrate adaptor of SCF E3 ubiquitin ligase *(ADO) &... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003839 gamma-glutamylcyclotransferase activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006749 glutathione metabolic process IEP HCCA
BP GO:0006751 glutathione catabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008097 5S rRNA binding IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016842 amidine-lyase activity IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0042219 cellular modified amino acid catabolic process IEP HCCA
BP GO:0043171 peptide catabolic process IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044273 sulfur compound catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000014 PAS 67 173
IPR001810 F-box_dom 220 262
No external refs found!