Tin_g07940


Description : not classified & original description: none


Gene families : OG0001027 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001027_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g07940

Target Alias Description ECC score Gene Family Method Actions
AT2G38160 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.03 OrthoFinder output from all 47 species
AT3G09000 No alias proline-rich family protein 0.02 OrthoFinder output from all 47 species
Ala_g02339 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g09932 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g37153 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g39879 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g40123 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene15387.t1 Aspi01Gene15387 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g12121 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g76969 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.02G101500.1 Ceric.02G101500 not classified & original description: pacid=50584382... 0.03 OrthoFinder output from all 47 species
Ceric.04G044000.1 Ceric.04G044000 not classified & original description: pacid=50631815... 0.04 OrthoFinder output from all 47 species
Ceric.31G009200.1 Ceric.31G009200 not classified & original description: pacid=50574505... 0.03 OrthoFinder output from all 47 species
Dac_g39903 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g10405 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01032844001 No alias No description available 0.03 OrthoFinder output from all 47 species
Msp_g27925 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g42334 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g18136 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g37862 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0030.g010358 No alias not classified & original description: CDS=1512-3749 0.02 OrthoFinder output from all 47 species
Sam_g26615 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g096180.4.1 Solyc03g096180 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g51848 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g54072 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g31226 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!