Tin_g07829 (CRR2)


Aliases : CRR2

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g07829

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00256920 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g21065... 0.03 OrthoFinder output from all 47 species
AMTR_s00032p00145640 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g22070... 0.03 OrthoFinder output from all 47 species
Adi_g018868 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g033617 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g42174 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g07468 EMB2261 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g11078 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g13276 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ala_g16531 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g18491 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g22597 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g25745 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g30691 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ala_g31168 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g36524 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Ala_g36535 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g38788 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g07079 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g16794 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g20910 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g24180 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g36807 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene12038.t1 Aspi01Gene12038 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene64067.t1 MEF19, Aspi01Gene64067 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene67429.t2 Aspi01Gene67429 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0102.g044571 No alias not classified & original description: CDS=1-2829 0.05 OrthoFinder output from all 47 species
Azfi_s0119.g046677 CRR2 not classified & original description: CDS=1-1557 0.05 OrthoFinder output from all 47 species
Cba_g02672 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05970 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g44509 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g67889 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g76621 EMB2758 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g03777 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g15083 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g30157 OTP82 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g30248 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g36039 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g40230 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g08616 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g21425 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g03987 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g05108 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05762 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dde_g05964 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g09519 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g15390 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g16087 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16392 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g16911 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g19684 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g19712 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21509 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g21990 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g22165 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22351 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23187 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23899 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24473 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g25070 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26387 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g28511 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g28526 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g46247 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g46329 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g49917 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g50255 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g13211 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g14560 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g15996 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26919 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g00723 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g04775 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g05304 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g13283 CRR22 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Len_g17337 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17726 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g18049 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g18885 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g22097 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g55568 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g06642 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06676 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g07422 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07753 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g05274 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g06496 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g11358 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g17701 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g18215 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g25303 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g25560 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g26428 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g35725 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g41204 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g44934 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g04945 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g19585 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g35181 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g38648 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g38771 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g23954 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g30911 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g35308 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g11821 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g12215 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g37149 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g60394 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63506 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g15155 REME1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g30997 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g04611 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g09778 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g17508 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g18809 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g23589 REME1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g53175 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g60243 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0137.g022493 No alias not classified & original description: CDS=1-2544 0.03 OrthoFinder output from all 47 species
Sam_g11781 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g19039 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo111982 No alias Pentatricopeptide repeat-containing protein At5g66520... 0.03 OrthoFinder output from all 47 species
Smo125795 REME1 Pentatricopeptide repeat-containing protein At2g13600... 0.08 OrthoFinder output from all 47 species
Smo126075 No alias Pentatricopeptide repeat-containing protein At4g30700... 0.04 OrthoFinder output from all 47 species
Solyc09g090440.1.1 LPA66, Solyc09g090440 Pentatricopeptide repeat-containing protein At5g66520... 0.06 OrthoFinder output from all 47 species
Spa_g02212 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g08793 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06101 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g17737 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g17746 OTP84 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g23085 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e039026_P001 OTP82, Zm00001e039026 Pentatricopeptide repeat-containing protein At5g48910... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
BP GO:0000723 telomere maintenance IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005381 iron ion transmembrane transporter activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006826 iron ion transport IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0032200 telomere organization IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
CC GO:0033573 high-affinity iron permease complex IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034755 iron ion transmembrane transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1902495 transmembrane transporter complex IEP HCCA
CC GO:1905862 ferroxidase complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
CC GO:1990351 transporter complex IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 182 229
IPR002885 Pentatricopeptide_repeat 359 384
IPR002885 Pentatricopeptide_repeat 459 481
IPR002885 Pentatricopeptide_repeat 283 331
IPR002885 Pentatricopeptide_repeat 385 432
IPR032867 DYW_dom 606 689
No external refs found!