hich a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid)." [GOC:dph, Tin_g07147 details
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  5. Tin_g07147

Tin_g07147


Description : not classified & original description: none


Gene families : OG0000144 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000144_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g07147

Target Alias Description ECC score Gene Family Method Actions
AT2G27580 No alias A20/AN1-like zinc finger family protein 0.03 OrthoFinder output from all 47 species
Adi_g020813 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g19505 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene64126.t2 Aspi01Gene64126 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05618 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07448 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20076 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G038300.1 Ceric.01G038300 not classified & original description: pacid=50591812... 0.04 OrthoFinder output from all 47 species
Dcu_g24458 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01033341001 No alias Zinc finger A20 and AN1 domain-containing... 0.03 OrthoFinder output from all 47 species
LOC_Os06g41010.1 LOC_Os06g41010 Zinc finger A20 and AN1 domain-containing... 0.05 OrthoFinder output from all 47 species
Len_g17465 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g00472 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g00614 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06968 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g21543 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g36014 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g36990 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g20395 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g31999 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13125 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g31313 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g26628 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g086970.4.1 Solyc01g086970 Zinc finger A20 and AN1 domain-containing... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005672 transcription factor TFIIA complex IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR000058 Znf_AN1 187 222
IPR002653 Znf_A20 24 46
No external refs found!