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  5. Tin_g06782

Tin_g06782 (HRE2)


Aliases : HRE2

Description : transcription factor component *(HRE/RAP2.12) of oxygen-sensor activity & original description: none


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g06782

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00238800 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AT1G50640 ATERF3, ERF3 ethylene responsive element binding factor 3 0.02 OrthoFinder output from all 47 species
Aev_g14600 RAP2.12 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Als_g37143 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g37382 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g45354 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.03 OrthoFinder output from all 47 species
Als_g49053 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Als_g50026 TINY2 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Als_g51447 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aop_g12266 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF19/20) &... 0.02 OrthoFinder output from all 47 species
Aop_g15011 DEAR3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g15838 tny subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene23568.t1 CRF3, Aspi01Gene23568 subgroup ERF-VI transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene25596.t1 Aspi01Gene25596 subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene66121.t1 Aspi01Gene66121 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05027 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Cba_g24870 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF19/20) &... 0.03 OrthoFinder output from all 47 species
Ceric.04G096400.1 ERF-1, ATERF-1,... subgroup ERF-IX transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.25G020600.1 ATERF12, ERF12,... subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.29G030400.1 AtERF48, DREB2C,... subgroup ERF-IV/DREB2 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ehy_g00819 ERF1, ATERF1 subgroup ERF-IX transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05437 No alias subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ehy_g11898 No alias subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ehy_g29769 No alias subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.02 OrthoFinder output from all 47 species
GSVIVT01017572001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
Gb_41445 No alias transcription factor (DREB) 0.01 OrthoFinder output from all 47 species
LOC_Os01g07120.1 DREB2A, DREB2,... transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
LOC_Os02g51670.1 RAP2.4, LOC_Os02g51670 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
LOC_Os04g32620.1 Rap2.6L, LOC_Os04g32620 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os04g34970.1 ERF110, LOC_Os04g34970 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
LOC_Os09g11480.2 RAP2.2, LOC_Os09g11480 Ethylene-responsive transcription factor ERF112... 0.02 OrthoFinder output from all 47 species
Lfl_g30898 RAP2.12 transcription factor component *(HRE/RAP2.12) of... 0.01 OrthoFinder output from all 47 species
MA_19420g0010 No alias transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
MA_8552524g0010 ERF-1, ATERF-1 transcription factor (ERF) 0.01 OrthoFinder output from all 47 species
Mp5g02590.1 No alias transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Msp_g04749 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Nbi_g11442 No alias subgroup ERF-V transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g11606 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Ore_g20838 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Pir_g01199 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Solyc01g008880.3.1 CRF5, Solyc01g008880 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc01g091760.3.1 RAP2.11, Solyc01g091760 transcription factor (ERF). transcription factor (ERN1) 0.02 OrthoFinder output from all 47 species
Solyc02g067020.1.1 RAP2.11, Solyc02g067020 transcription factor (ERF). transcription factor (ERN1) 0.01 OrthoFinder output from all 47 species
Solyc04g071770.3.1 ERF110, Solyc04g071770 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc06g063070.3.1 RAP2.12, Solyc06g063070 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc10g006130.1.1 ATERF3, ERF3,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Spa_g21493 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Spa_g22183 CRF4 subgroup ERF-VI transcription factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP HCCA
MF GO:0018580 nitronate monooxygenase activity IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0022904 respiratory electron transport chain IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 68 117
No external refs found!