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  5. Tin_g06768

Tin_g06768 (MCM5)


Aliases : MCM5

Description : component *(MCM5) of MCM replicative DNA helicase complex & original description: none


Gene families : OG0006960 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006960_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g06768
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00026p00049360 MCM5,... Cell cycle.interphase.DNA replication.preinitiation.MCM... 0.06 OrthoFinder output from all 47 species
AT2G07690 MCM5 Minichromosome maintenance (MCM2/3/5) family protein 0.14 OrthoFinder output from all 47 species
Ala_g32000 MCM5 component *(MCM5) of MCM replicative DNA helicase... 0.14 OrthoFinder output from all 47 species
Als_g01075 MCM5 component *(MCM5) of MCM replicative DNA helicase... 0.06 OrthoFinder output from all 47 species
Aop_g14370 MCM5 component *(MCM5) of MCM replicative DNA helicase... 0.19 OrthoFinder output from all 47 species
Aspi01Gene34859.t1 MCM5, Aspi01Gene34859 component *(MCM5) of MCM replicative DNA helicase... 0.09 OrthoFinder output from all 47 species
Azfi_s0083.g038881 MCM5 component *(MCM5) of MCM replicative DNA helicase... 0.09 OrthoFinder output from all 47 species
Ceric.25G009500.1 MCM5, Ceric.25G009500 component *(MCM5) of MCM replicative DNA helicase... 0.17 OrthoFinder output from all 47 species
Cre01.g023150 MCM5 Cell cycle.interphase.DNA replication.preinitiation.MCM... 0.05 OrthoFinder output from all 47 species
Dac_g15442 MCM5 component *(MCM5) of MCM replicative DNA helicase... 0.17 OrthoFinder output from all 47 species
Dcu_g06401 MCM5 component *(MCM5) of MCM replicative DNA helicase... 0.11 OrthoFinder output from all 47 species
GSVIVT01001046001 MCM5 Cell cycle.interphase.DNA replication.preinitiation.MCM... 0.13 OrthoFinder output from all 47 species
Gb_09107 MCM5 DNA replication licensing factor MCM5 OS=Oryza sativa... 0.15 OrthoFinder output from all 47 species
LOC_Os02g55410.1 MCM5, LOC_Os02g55410 component MCM5 of MCM replicative DNA helicase complex 0.13 OrthoFinder output from all 47 species
Len_g03362 MCM5 component *(MCM5) of MCM replicative DNA helicase... 0.16 OrthoFinder output from all 47 species
Lfl_g19529 MCM5 component *(MCM5) of MCM replicative DNA helicase... 0.06 OrthoFinder output from all 47 species
MA_10426777g0010 MCM5 component MCM5 of MCM replicative DNA helicase complex 0.14 OrthoFinder output from all 47 species
Mp3g08120.1 MCM5 component MCM5 of MCM replicative DNA helicase complex 0.17 OrthoFinder output from all 47 species
Msp_g01667 MCM5 component *(MCM5) of MCM replicative DNA helicase... 0.12 OrthoFinder output from all 47 species
Nbi_g01162 MCM5 component *(MCM5) of MCM replicative DNA helicase... 0.06 OrthoFinder output from all 47 species
Ppi_g03897 MCM5 component *(MCM5) of MCM replicative DNA helicase... 0.12 OrthoFinder output from all 47 species
Sam_g09702 No alias component *(MCM5) of MCM replicative DNA helicase... 0.1 OrthoFinder output from all 47 species
Smo88878 MCM5 Cell cycle.interphase.DNA replication.preinitiation.MCM... 0.05 OrthoFinder output from all 47 species
Solyc07g005020.3.1 MCM5, Solyc07g005020 component MCM5 of MCM replicative DNA helicase complex 0.11 OrthoFinder output from all 47 species
Spa_g08592 MCM5 component *(MCM5) of MCM replicative DNA helicase... 0.18 OrthoFinder output from all 47 species
Spa_g08593 MCM5 component *(MCM5) of MCM replicative DNA helicase... 0.17 OrthoFinder output from all 47 species
Spa_g45329 MCM5 component *(MCM5) of MCM replicative DNA helicase... 0.03 OrthoFinder output from all 47 species
Zm00001e016127_P001 MCM5, Zm00001e016127 component MCM5 of MCM replicative DNA helicase complex 0.12 OrthoFinder output from all 47 species
Zm00001e023682_P001 MCM5, Zm00001e023682 DNA replication licensing factor MCM5 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0032508 DNA duplex unwinding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006270 DNA replication initiation IEP HCCA
BP GO:0006275 regulation of DNA replication IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0007062 sister chromatid cohesion IEP HCCA
BP GO:0007064 mitotic sister chromatid cohesion IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009262 deoxyribonucleotide metabolic process IEP HCCA
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP HCCA
BP GO:0010639 negative regulation of organelle organization IEP HCCA
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP HCCA
MF GO:0019207 kinase regulator activity IEP HCCA
MF GO:0019887 protein kinase regulator activity IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
CC GO:0031390 Ctf18 RFC-like complex IEP HCCA
BP GO:0032780 negative regulation of ATP-dependent activity IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0033044 regulation of chromosome organization IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
CC GO:0042555 MCM complex IEP HCCA
BP GO:0043086 negative regulation of catalytic activity IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043462 regulation of ATP-dependent activity IEP HCCA
BP GO:0044092 negative regulation of molecular function IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0051095 regulation of helicase activity IEP HCCA
BP GO:0051097 negative regulation of helicase activity IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051129 negative regulation of cellular component organization IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
BP GO:1905462 regulation of DNA duplex unwinding IEP HCCA
BP GO:1905463 negative regulation of DNA duplex unwinding IEP HCCA
BP GO:1905774 regulation of DNA helicase activity IEP HCCA
BP GO:1905775 negative regulation of DNA helicase activity IEP HCCA
BP GO:2001251 negative regulation of chromosome organization IEP HCCA
InterPro domains Description Start Stop
IPR033762 MCM_OB 135 270
IPR001208 MCM_dom 315 535
IPR041562 MCM_lid 553 642
IPR027925 MCM_N 33 124
No external refs found!