Tin_g06729 (HTA2)

Aliases : HTA2

Description : histone *(H2A) & original description: none

Gene families : OG0000117 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000117_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Tin_g06729

Target	Alias	Description	ECC score	Gene Family Method
Als_g05288	HTA6	histone *(H2A) & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g03324	HTA13	histone *(H2A) & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g78608	HTA2	histone *(H2A) & original description: none	0.05	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001085.4	GAMMA-H2AX,...	Chromatin organisation.histones.H2A-type histone	0.04	OrthoFinder output from all 47 species
Nbi_g42735	RAT5, HTA1, ATHTA1	histone *(H2A) & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g11312	RAT5, HTA1, ATHTA1	histone *(H2A) & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0043565	sequence-specific DNA binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR032454	Histone_H2A_C	132	162
IPR007125	Histone_H2A/H2B/H3	53	129

External Links

No external refs found!