1. Home
  2. Species
  3. Tectaria incisa
  4. Sequence
  5. Tin_g06661

Tin_g06661


Description : scaffold nucleoporin of nuclear pore complex *(NUP75/85) & original description: none


Gene families : OG0004258 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004258_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g06661

Target Alias Description ECC score Gene Family Method Actions
AT4G32910 No alias CONTAINS InterPro DOMAIN/s: Nuclear pore complex... 0.04 OrthoFinder output from all 47 species
Aop_g02903 No alias scaffold nucleoporin of nuclear pore complex *(NUP75/85)... 0.03 OrthoFinder output from all 47 species
Azfi_s0034.g025285 No alias scaffold nucleoporin of nuclear pore complex *(NUP75/85)... 0.05 OrthoFinder output from all 47 species
Ceric.05G088400.1 Ceric.05G088400 scaffold nucleoporin of nuclear pore complex *(NUP75/85)... 0.05 OrthoFinder output from all 47 species
Cre08.g383650 No alias No description available 0.02 OrthoFinder output from all 47 species
Dde_g09339 No alias scaffold nucleoporin of nuclear pore complex *(NUP75/85)... 0.03 OrthoFinder output from all 47 species
GSVIVT01035621001 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.04 OrthoFinder output from all 47 species
LOC_Os01g54240.1 LOC_Os01g54240 NUP75/85 scaffold nucleoporin of nuclear pore complex 0.06 OrthoFinder output from all 47 species
Lfl_g28589 No alias scaffold nucleoporin of nuclear pore complex *(NUP75/85)... 0.04 OrthoFinder output from all 47 species
Mp1g11600.1 No alias NUP75/85 scaffold nucleoporin of nuclear pore complex 0.03 OrthoFinder output from all 47 species
Ore_g22939 No alias scaffold nucleoporin of nuclear pore complex *(NUP75/85)... 0.03 OrthoFinder output from all 47 species
Pir_g07485 No alias scaffold nucleoporin of nuclear pore complex *(NUP75/85)... 0.03 OrthoFinder output from all 47 species
Solyc08g066580.4.1 Solyc08g066580 NUP75/85 scaffold nucleoporin of nuclear pore complex 0.04 OrthoFinder output from all 47 species
Spa_g00457 No alias scaffold nucleoporin of nuclear pore complex *(NUP75/85)... 0.03 OrthoFinder output from all 47 species
Zm00001e019793_P001 Zm00001e019793 NUP75/85 scaffold nucleoporin of nuclear pore complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR011502 Nucleoporin_Nup85 77 678
No external refs found!