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  5. Tin_g06541

Tin_g06541


Description : not classified & original description: none


Gene families : OG0001845 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001845_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g06541

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00109000 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00092p00074340 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Ala_g25560 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26838 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g28539 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g21433 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G081600.1 Ceric.04G081600 not classified & original description: pacid=50632175... 0.04 OrthoFinder output from all 47 species
Dac_g15655 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g19248 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01010242001 No alias No description available 0.02 OrthoFinder output from all 47 species
LOC_Os02g02500.1 LOC_Os02g02500 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp1g28990.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp2g17160.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Nbi_g06710 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g08078 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e025360_P003 Zm00001e025360 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
MF GO:0008061 chitin binding IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR005516 Remorin_C 359 462
No external refs found!