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  5. Tin_g06422

Tin_g06422


Description : not classified & original description: none


Gene families : OG0000461 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000461_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g06422

Target Alias Description ECC score Gene Family Method Actions
AT1G23140 No alias Calcium-dependent lipid-binding (CaLB domain) family protein 0.02 OrthoFinder output from all 47 species
Aop_g04285 AGD12, ZAC not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g72230.1 LOC_Os01g72230 class III ARF-GAP ARF-GTPase-activating protein 0.01 OrthoFinder output from all 47 species
LOC_Os02g10480.6 AGD12, ZAC,... class III ARF-GAP ARF-GTPase-activating protein 0.02 OrthoFinder output from all 47 species
Pir_g04548 AGD12, ZAC not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g03709 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g063355.1.1 Solyc02g063355 CAR abscisic acid receptor recruitment factor 0.02 OrthoFinder output from all 47 species
Solyc04g015070.3.1 Solyc04g015070 Protein C2-DOMAIN ABA-RELATED 11 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Zm00001e010435_P001 Zm00001e010435 Protein C2-DOMAIN ABA-RELATED 5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e020423_P001 Zm00001e020423 CAR abscisic acid receptor recruitment factor 0.02 OrthoFinder output from all 47 species
Zm00001e027905_P001 Zm00001e027905 CAR abscisic acid receptor recruitment factor 0.02 OrthoFinder output from all 47 species
Zm00001e028315_P003 Zm00001e028315 class III ARF-GAP ARF-GTPase-activating protein 0.03 OrthoFinder output from all 47 species
Zm00001e032704_P003 Zm00001e032704 CAR abscisic acid receptor recruitment factor 0.03 OrthoFinder output from all 47 species
Zm00001e035048_P001 Zm00001e035048 Protein C2-DOMAIN ABA-RELATED 5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA

No InterPro domains available for this sequence

No external refs found!