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  5. Tin_g05897

Tin_g05897


Description : not classified & original description: none


Gene families : OG0001647 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001647_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g05897

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00096p00034760 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT1G11915 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.02 OrthoFinder output from all 47 species
AT3G17350 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.02 OrthoFinder output from all 47 species
Ala_g14700 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01012680001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01017668001 No alias No description available 0.02 OrthoFinder output from all 47 species
Lfl_g11157 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_11646g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g15335 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g18130 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g62686 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0023.g008851 No alias not classified & original description: CDS=1-1029 0.04 OrthoFinder output from all 47 species
Solyc01g088500.3.1 Solyc01g088500 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc02g080900.3.1 Solyc02g080900 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc03g112790.3.1 Solyc03g112790 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g30835 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0030247 polysaccharide binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR025287 WAK_GUB 31 90
No external refs found!