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  5. Tin_g05646

Tin_g05646


Description : component *(NFRKB1) of INO80 chromaTin remodeling complex & original description: none


Gene families : OG0001406 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001406_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g05646

Target Alias Description ECC score Gene Family Method Actions
Dac_g13605 No alias component *(NFRKB1) of INO80 chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Dcu_g01945 No alias component *(NFRKB1) of INO80 chromatin remodeling... 0.05 OrthoFinder output from all 47 species
GSVIVT01025073001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_27287 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os05g02680.1 LOC_Os05g02680 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Pir_g16735 No alias component *(NFRKB1) of INO80 chromatin remodeling... 0.04 OrthoFinder output from all 47 species
Solyc11g072810.2.1 Solyc11g072810 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g47099 No alias component *(NFRKB1) of INO80 chromatin remodeling... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007062 sister chromatid cohesion IEP HCCA
BP GO:0007064 mitotic sister chromatid cohesion IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!