1. Home
  2. Species
  3. Tectaria incisa
  4. Sequence
  5. Tin_g05601

Tin_g05601 (EIF3B-2, ATEIF3B-2, EIF3B)


Aliases : EIF3B-2, ATEIF3B-2, EIF3B

Description : component *(eIF3b) of eIF3 mRNA-to-PIC binding complex & original description: none


Gene families : OG0004558 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004558_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g05601

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00037p00235640 EIF3B-2,... Protein biosynthesis.translation... 0.02 OrthoFinder output from all 47 species
AT5G25780 EIF3B-2, ATEIF3B-2, EIF3B eukaryotic translation initiation factor 3B-2 0.02 OrthoFinder output from all 47 species
Ala_g08786 EIF3B-2, ATEIF3B-2, EIF3B component *(eIF3b) of eIF3 mRNA-to-PIC binding complex &... 0.05 OrthoFinder output from all 47 species
Als_g03187 EIF3B-2, ATEIF3B-2, EIF3B component *(eIF3b) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species
Aop_g13421 EIF3B-2, ATEIF3B-2, EIF3B component *(eIF3b) of eIF3 mRNA-to-PIC binding complex &... 0.08 OrthoFinder output from all 47 species
Azfi_s0538.g076306 EIF3B-2, ATEIF3B-2, EIF3B component *(eIF3b) of eIF3 mRNA-to-PIC binding complex &... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020848.60 EIF3B-2, ATEIF3B-2, EIF3B Protein biosynthesis.translation... 0.04 OrthoFinder output from all 47 species
Cre03.g190100 EIF3B-2, ATEIF3B-2, EIF3B Protein biosynthesis.translation... 0.03 OrthoFinder output from all 47 species
Dac_g01727 EIF3B-2, ATEIF3B-2, EIF3B component *(eIF3b) of eIF3 mRNA-to-PIC binding complex &... 0.04 OrthoFinder output from all 47 species
Gb_06841 ATTIF3B1,... component eIF3b of eIF3 mRNA-to-PIC binding complex 0.02 OrthoFinder output from all 47 species
LOC_Os10g41960.1 ATTIF3B1,... component eIF3b of eIF3 mRNA-to-PIC binding complex 0.04 OrthoFinder output from all 47 species
MA_86963g0010 EIF3B-2, ATEIF3B-2, EIF3B Eukaryotic translation initiation factor 3 subunit B... 0.03 OrthoFinder output from all 47 species
MA_86963g0020 EIF3B-2, ATEIF3B-2, EIF3B Eukaryotic translation initiation factor 3 subunit B... 0.02 OrthoFinder output from all 47 species
Mp8g14030.1 EIF3B-2, ATEIF3B-2, EIF3B component eIF3b of eIF3 mRNA-to-PIC binding complex 0.04 OrthoFinder output from all 47 species
Sam_g10595 No alias component *(eIF3b) of eIF3 mRNA-to-PIC binding complex &... 0.05 OrthoFinder output from all 47 species
Zm00001e002405_P001 ATTIF3B1,... component eIF3b of eIF3 mRNA-to-PIC binding complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
CC GO:0005778 peroxisomal membrane IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007031 peroxisome organization IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031903 microbody membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
CC GO:0042579 microbody IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR013979 TIF_beta_prop-like 413 613
IPR000504 RRM_dom 87 144
No external refs found!