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  5. Tin_g05584

Tin_g05584 (ATGH9A1, IRX2, KOR,...)


Aliases : ATGH9A1, IRX2, KOR, TSD1, RSW2, GH9A1, KOR1, DEC

Description : cellulose synthase endo-1,4-beta-glucanase *(KOR) & original description: none


Gene families : OG0001763 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001763_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g05584
Cluster HCCA: Cluster_152

Target Alias Description ECC score Gene Family Method Actions
AT5G49720 ATGH9A1, IRX2,... glycosyl hydrolase 9A1 0.07 OrthoFinder output from all 47 species
Adi_g060755 ATGH9A1, IRX2,... cellulose synthase endo-1,4-beta-glucanase *(KOR) &... 0.03 OrthoFinder output from all 47 species
Adi_g081617 ATGH9A1, IRX2,... cellulose synthase endo-1,4-beta-glucanase *(KOR) &... 0.04 OrthoFinder output from all 47 species
Aev_g07872 ATGH9A1, IRX2,... cellulose synthase endo-1,4-beta-glucanase *(KOR) &... 0.04 OrthoFinder output from all 47 species
Ala_g04747 ATGH9A1, IRX2,... cellulose synthase endo-1,4-beta-glucanase *(KOR) &... 0.04 OrthoFinder output from all 47 species
Als_g12666 ATGH9A1, IRX2,... cellulose synthase endo-1,4-beta-glucanase *(KOR) &... 0.04 OrthoFinder output from all 47 species
Als_g24026 ATGH9A1, IRX2,... cellulose synthase endo-1,4-beta-glucanase *(KOR) &... 0.03 OrthoFinder output from all 47 species
Aob_g17252 ATGH9A1, IRX2,... cellulose synthase endo-1,4-beta-glucanase *(KOR) &... 0.07 OrthoFinder output from all 47 species
Aop_g04850 ATGH9A1, IRX2,... cellulose synthase endo-1,4-beta-glucanase *(KOR) &... 0.03 OrthoFinder output from all 47 species
Aop_g05344 ATGH9A1, IRX2,... cellulose synthase endo-1,4-beta-glucanase *(KOR) &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene12771.t1 ATGH9A1, IRX2,... cellulose synthase endo-1,4-beta-glucanase *(KOR) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene51495.t1 ATGH9A1, IRX2,... cellulose synthase endo-1,4-beta-glucanase *(KOR) &... 0.03 OrthoFinder output from all 47 species
Azfi_s0008.g011361 ATGH9A1, IRX2,... cellulose synthase endo-1,4-beta-glucanase *(KOR) &... 0.03 OrthoFinder output from all 47 species
Ceric.01G101500.1 ATGH9A1, IRX2,... cellulose synthase endo-1,4-beta-glucanase *(KOR) &... 0.09 OrthoFinder output from all 47 species
Ceric.1Z085400.1 ATGH9A1, IRX2,... cellulose synthase endo-1,4-beta-glucanase *(KOR) &... 0.04 OrthoFinder output from all 47 species
Dac_g04679 ATGH9A1, IRX2,... cellulose synthase endo-1,4-beta-glucanase *(KOR) &... 0.05 OrthoFinder output from all 47 species
Dde_g10549 ATGH9A1, IRX2,... cellulose synthase endo-1,4-beta-glucanase *(KOR) &... 0.06 OrthoFinder output from all 47 species
Dde_g21988 ATGH9A1, IRX2,... cellulose synthase endo-1,4-beta-glucanase *(KOR) &... 0.03 OrthoFinder output from all 47 species
Ehy_g03924 ATGH9A1, IRX2,... cellulose synthase endo-1,4-beta-glucanase *(KOR) &... 0.06 OrthoFinder output from all 47 species
GSVIVT01023102001 ATGH9A1, IRX2,... Cell wall.cellulose.synthesis.cellulose synthase complex... 0.02 OrthoFinder output from all 47 species
Gb_13362 ATGH9A1, IRX2,... KOR-type cellulose synthase endo-1,4-beta-glucanase 0.03 OrthoFinder output from all 47 species
LOC_Os03g21210.1 ATGH9A1, IRX2,... KOR-type cellulose synthase endo-1,4-beta-glucanase 0.02 OrthoFinder output from all 47 species
LOC_Os03g52630.1 ATGH9A1, IRX2,... KOR-type cellulose synthase endo-1,4-beta-glucanase 0.06 OrthoFinder output from all 47 species
Len_g07795 ATGH9A1, IRX2,... cellulose synthase endo-1,4-beta-glucanase *(KOR) &... 0.04 OrthoFinder output from all 47 species
Mp1g24780.1 ATGH9A1, IRX2,... KOR-type cellulose synthase endo-1,4-beta-glucanase 0.05 OrthoFinder output from all 47 species
Msp_g36506 ATGH9A1, IRX2,... cellulose synthase endo-1,4-beta-glucanase *(KOR) &... 0.05 OrthoFinder output from all 47 species
Nbi_g09314 ATGH9A1, IRX2,... cellulose synthase endo-1,4-beta-glucanase *(KOR) &... 0.11 OrthoFinder output from all 47 species
Ore_g11296 ATGH9A1, IRX2,... cellulose synthase endo-1,4-beta-glucanase *(KOR) &... 0.04 OrthoFinder output from all 47 species
Pir_g02285 ATGH9A1, IRX2,... cellulose synthase endo-1,4-beta-glucanase *(KOR) &... 0.03 OrthoFinder output from all 47 species
Pir_g14287 ATGH9A1, IRX2,... cellulose synthase endo-1,4-beta-glucanase *(KOR) &... 0.05 OrthoFinder output from all 47 species
Pnu_g17152 ATGH9A1, IRX2,... cellulose synthase endo-1,4-beta-glucanase *(KOR) &... 0.04 OrthoFinder output from all 47 species
Ppi_g03146 ATGH9A1, IRX2,... cellulose synthase endo-1,4-beta-glucanase *(KOR) &... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0093.g019107 ATGH9A1, IRX2,... cellulose synthase endo-1,4-beta-glucanase *(KOR) &... 0.03 OrthoFinder output from all 47 species
Smo266522 ATGH9A1, IRX2,... Cell wall.cellulose.synthesis.cellulose synthase complex... 0.06 OrthoFinder output from all 47 species
Smo75214 ATGH9A1, IRX2,... Cell wall.cellulose.synthesis.cellulose synthase complex... 0.03 OrthoFinder output from all 47 species
Solyc01g102580.3.1 ATGH9A1, IRX2,... KOR-type cellulose synthase endo-1,4-beta-glucanase 0.02 OrthoFinder output from all 47 species
Solyc05g005080.3.1 ATGH9A1, IRX2,... KOR-type cellulose synthase endo-1,4-beta-glucanase 0.07 OrthoFinder output from all 47 species
Solyc11g008820.2.1 ATGH9A2, KOR2,... KOR-type cellulose synthase endo-1,4-beta-glucanase 0.03 OrthoFinder output from all 47 species
Spa_g10789 ATGH9A1, IRX2,... cellulose synthase endo-1,4-beta-glucanase *(KOR) &... 0.03 OrthoFinder output from all 47 species
Spa_g25788 ATGH9A1, IRX2,... cellulose synthase endo-1,4-beta-glucanase *(KOR) &... 0.1 OrthoFinder output from all 47 species
Zm00001e005591_P004 ATGH9A1, IRX2,... KOR-type cellulose synthase endo-1,4-beta-glucanase 0.03 OrthoFinder output from all 47 species
Zm00001e007515_P001 ATGH9A1, IRX2,... KOR-type cellulose synthase endo-1,4-beta-glucanase 0.03 OrthoFinder output from all 47 species
Zm00001e012080_P004 ATGH9A1, IRX2,... KOR-type cellulose synthase endo-1,4-beta-glucanase 0.03 OrthoFinder output from all 47 species
Zm00001e038255_P002 ATGH9A1, IRX2,... KOR-type cellulose synthase endo-1,4-beta-glucanase 0.04 OrthoFinder output from all 47 species
Zm00001e042024_P001 ATGH9A1, IRX2,... KOR-type cellulose synthase endo-1,4-beta-glucanase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0010215 cellulose microfibril organization IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0030198 extracellular matrix organization IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0043062 extracellular structure organization IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
InterPro domains Description Start Stop
IPR001701 Glyco_hydro_9 107 574
No external refs found!