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  5. Tin_g05394

Tin_g05394


Description : deubiquiTinase & original description: none


Gene families : OG0000778 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000778_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g05394

Target Alias Description ECC score Gene Family Method Actions
Als_g04241 No alias deubiquitinase & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g32937 No alias deubiquitinase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002326 No alias deubiquitinase & original description: CDS=7-807 0.02 OrthoFinder output from all 47 species
Solyc06g068380.4.1 Solyc06g068380 peptidase (PPPDE) 0.04 OrthoFinder output from all 47 species
Solyc12g089060.2.1 Solyc12g089060 peptidase (PPPDE) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008233 peptidase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
InterPro domains Description Start Stop
IPR008580 PPPDE_dom 16 149
No external refs found!