Tin_g05202


Description : not classified & original description: none


Gene families : OG0002536 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002536_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g05202

Target Alias Description ECC score Gene Family Method Actions
Adi_g071542 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g02695 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g14510 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g03196 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g04494 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19225 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g23138 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g41675 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02259 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07732 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g32490 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.12G032700.1 Ceric.12G032700 not classified & original description: pacid=50602157... 0.01 OrthoFinder output from all 47 species
Ceric.1Z179300.1 Ceric.1Z179300 not classified & original description: pacid=50577067... 0.02 OrthoFinder output from all 47 species
Dac_g20889 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g01767 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g02991 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g15095 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g06771 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g07217 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g07625 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13355 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16191 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g31050 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g45458 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0031123 RNA 3'-end processing IEP HCCA
BP GO:0031124 mRNA 3'-end processing IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0042393 histone binding IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!