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  5. Tin_g05083

Tin_g05083 (TUB6)


Aliases : TUB6

Description : beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer & original description: none


Gene families : OG0000152 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000152_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g05083
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AT5G12250 TUB6 beta-6 tubulin 0.02 OrthoFinder output from all 47 species
AT5G62690 TUB2 tubulin beta chain 2 0.02 OrthoFinder output from all 47 species
AT5G62700 TUB3 tubulin beta chain 3 0.02 OrthoFinder output from all 47 species
Adi_g002835 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Adi_g048027 TUB8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g100349 TUB1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g105532 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Aev_g28137 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Ala_g03796 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Als_g10858 TUB8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g10860 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Als_g18460 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
Als_g27651 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Als_g33099 TUB6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04194 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Aop_g20652 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Azfi_s0678.g081838 TUB6 not classified & original description: CDS=1-1224 0.03 OrthoFinder output from all 47 species
Cba_g06879 TUB6 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g15536 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Cba_g15537 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
Cba_g61850 TUB6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g69323 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
Ceric.07G056800.1 TUB6, Ceric.07G056800 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Dac_g42639 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Dcu_g06899 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Dcu_g08335 TUB7 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g13446 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Dde_g05253 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Ehy_g30121 TUB8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01019758001 TUB6 Tubulin beta-4 chain OS=Eleusine indica 0.02 OrthoFinder output from all 47 species
GSVIVT01028941001 TUB8 Tubulin beta-8 chain OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Gb_15590 TUB2 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 OrthoFinder output from all 47 species
Gb_28116 TUB6 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 OrthoFinder output from all 47 species
LOC_Os01g59150.1 TUB6, LOC_Os01g59150 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 OrthoFinder output from all 47 species
LOC_Os02g07060.1 TUB8, LOC_Os02g07060 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.05 OrthoFinder output from all 47 species
Len_g08235 TUB6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g08236 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Len_g12596 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Len_g31234 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Lfl_g06502 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.07 OrthoFinder output from all 47 species
MA_230579g0010 TUB1 Tubulin beta-8 chain OS=Zea mays (sp|q41785|tbb8_maize : 281.0) 0.03 OrthoFinder output from all 47 species
MA_55439g0010 TUB2 Tubulin beta-1 chain OS=Solanum tuberosum... 0.03 OrthoFinder output from all 47 species
MA_9578301g0010 TUB8 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 OrthoFinder output from all 47 species
Mp1g20730.1 TUB6 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 OrthoFinder output from all 47 species
Msp_g09508 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Msp_g25659 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Msp_g29673 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Pir_g02530 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Ppi_g22152 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.06 OrthoFinder output from all 47 species
Ppi_g35826 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Ppi_g61758 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0264.g026924 TUB1 not classified & original description: CDS=124-1059 0.04 OrthoFinder output from all 47 species
Sam_g08880 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g005910.4.1 TUB8, Solyc06g005910 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 OrthoFinder output from all 47 species
Solyc10g080940.3.1 TUB6, Solyc10g080940 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 OrthoFinder output from all 47 species
Solyc10g085020.3.1 TUB8, Solyc10g085020 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 OrthoFinder output from all 47 species
Solyc10g086760.2.1 TUB8, Solyc10g086760 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 OrthoFinder output from all 47 species
Spa_g13732 TUB7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g40586 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Spa_g40800 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Spa_g48008 TUB8 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g50619 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Spa_g54478 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Spa_g54936 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Tin_g06951 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Tin_g09112 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Zm00001e017421_P002 TUB6, Zm00001e017421 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 OrthoFinder output from all 47 species
Zm00001e028896_P004 TUB6, Zm00001e028896 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003008 Tubulin_FtsZ_GTPase 3 211
IPR018316 Tubulin/FtsZ_2-layer-sand-dom 261 382
No external refs found!